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GOLGA8A (golgin A8 family member A)

Identity

Alias_namesgolgi autoantigen, golgin subfamily a, 8A
golgin A8 family, member A
Alias_symbol (synonym)GM88
GOLGIN-67
Other alias
HGNC (Hugo) GOLGA8A
LocusID (NCBI) 23015
Atlas_Id 63890
Location 15q14  [Link to chromosome band 15q14]
Location_base_pair Starts at 34379069 and ends at 34389800 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GOLGA8A (15q14) / CRLF2 (Xp22.33)NXF3 (Xq22.1) / GOLGA8A (15q14)UBE2Q2 (15q24.2) / GOLGA8A (15q14)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GOLGA8A   31972
Cards
Entrez_Gene (NCBI)GOLGA8A  23015  golgin A8 family member A
AliasesGM88
GeneCards (Weizmann)GOLGA8A
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:34379069-34389800 [Contig_View]  GOLGA8A [Vega]
TCGA cBioPortalGOLGA8A
AceView (NCBI)GOLGA8A
Genatlas (Paris)GOLGA8A
WikiGenes23015
SOURCE (Princeton)GOLGA8A
Genetics Home Reference (NIH)GOLGA8A
Genomic and cartography
GoldenPath hg38 (UCSC)GOLGA8A  -     chr15:34379069-34389800 -  15q14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GOLGA8A  -     15q14   [Description]    (hg19-Feb_2009)
EnsemblGOLGA8A - 15q14 [CytoView hg19]  GOLGA8A - 15q14 [CytoView hg38]
Mapping of homologs : NCBIGOLGA8A [Mapview hg19]  GOLGA8A [Mapview hg38]
OMIM616180   
Gene and transcription
Genbank (Entrez)AB020662 AF163441 AF204231 AK123221 AL117569
RefSeq transcript (Entrez)NM_181077
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GOLGA8A
Cluster EST : UnigeneHs.720151 [ NCBI ]
CGAP (NCI)Hs.720151
Gene ExpressionGOLGA8A [ NCBI-GEO ]   GOLGA8A [ EBI - ARRAY_EXPRESS ]   GOLGA8A [ SEEK ]   GOLGA8A [ MEM ]
Gene Expression Viewer (FireBrowse)GOLGA8A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23015
GTEX Portal (Tissue expression)GOLGA8A
Protein : pattern, domain, 3D structure
UniProt/SwissProtA7E2F4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA7E2F4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA7E2F4
Splice isoforms : SwissVarA7E2F4
PhosPhoSitePlusA7E2F4
Domains : Interpro (EBI)Golgin_A   
Domain families : Pfam (Sanger)GOLGA2L5 (PF15070)   
Domain families : Pfam (NCBI)pfam15070   
Conserved Domain (NCBI)GOLGA8A
DMDM Disease mutations23015
Blocks (Seattle)GOLGA8A
SuperfamilyA7E2F4
Peptide AtlasA7E2F4
HPRD09974
IPIIPI00377137   IPI00746207   IPI00016475   
Protein Interaction databases
DIP (DOE-UCLA)A7E2F4
IntAct (EBI)A7E2F4
BioGRIDGOLGA8A
STRING (EMBL)GOLGA8A
ZODIACGOLGA8A
Ontologies - Pathways
QuickGOA7E2F4
Ontology : AmiGOGolgi apparatus  cytosol  Golgi cisterna membrane  
Ontology : EGO-EBIGolgi apparatus  cytosol  Golgi cisterna membrane  
NDEx NetworkGOLGA8A
Atlas of Cancer Signalling NetworkGOLGA8A
Wikipedia pathwaysGOLGA8A
Orthology - Evolution
OrthoDB23015
Phylogenetic Trees/Animal Genes : TreeFamGOLGA8A
HOVERGENA7E2F4
HOGENOMA7E2F4
Homologs : HomoloGeneGOLGA8A
Homology/Alignments : Family Browser (UCSC)GOLGA8A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGOLGA8A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GOLGA8A
dbVarGOLGA8A
ClinVarGOLGA8A
1000_GenomesGOLGA8A 
Exome Variant ServerGOLGA8A
ExAC (Exome Aggregation Consortium)GOLGA8A (select the gene name)
Genetic variants : HAPMAP23015
Genomic Variants (DGV)GOLGA8A [DGVbeta]
DECIPHERGOLGA8A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGOLGA8A 
Mutations
ICGC Data PortalGOLGA8A 
TCGA Data PortalGOLGA8A 
Broad Tumor PortalGOLGA8A
OASIS PortalGOLGA8A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGOLGA8A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGOLGA8A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GOLGA8A
DgiDB (Drug Gene Interaction Database)GOLGA8A
DoCM (Curated mutations)GOLGA8A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GOLGA8A (select a term)
intoGenGOLGA8A
Cancer3DGOLGA8A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616180   
Orphanet
MedgenGOLGA8A
Genetic Testing Registry GOLGA8A
NextProtA7E2F4 [Medical]
TSGene23015
GENETestsGOLGA8A
Target ValidationGOLGA8A
Huge Navigator GOLGA8A [HugePedia]
snp3D : Map Gene to Disease23015
BioCentury BCIQGOLGA8A
ClinGenGOLGA8A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23015
Chemical/Pharm GKB GenePA142671716
Clinical trialGOLGA8A
Miscellaneous
canSAR (ICR)GOLGA8A (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGOLGA8A
EVEXGOLGA8A
GoPubMedGOLGA8A
iHOPGOLGA8A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:50:58 CEST 2017

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