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GOLGA8CP (golgin A8 family member C, pseudogene)

Identity

Alias_namesGOLGA8C
golgi autoantigen, golgin subfamily a, 8C
golgin A8 family, member C
golgin A8 family, member C, pseudogene
Other alias
HGNC (Hugo) GOLGA8CP
LocusID (NCBI) 729786
Atlas_Id 63892
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 20562349 and ends at 20575703 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GOLGA8CP   32375
Cards
Entrez_Gene (NCBI)GOLGA8CP  729786  golgin A8 family member C, pseudogene
AliasesGOLGA8C
GeneCards (Weizmann)GOLGA8CP
Ensembl hg19 (Hinxton)ENSG00000181984 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181984 [Gene_View]  chr15:20562349-20575703 [Contig_View]  GOLGA8CP [Vega]
ICGC DataPortalENSG00000181984
TCGA cBioPortalGOLGA8CP
AceView (NCBI)GOLGA8CP
Genatlas (Paris)GOLGA8CP
WikiGenes729786
SOURCE (Princeton)GOLGA8CP
Genetics Home Reference (NIH)GOLGA8CP
Genomic and cartography
GoldenPath hg38 (UCSC)GOLGA8CP  -     chr15:20562349-20575703 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GOLGA8CP  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblGOLGA8CP - 15q11.2 [CytoView hg19]  GOLGA8CP - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBIGOLGA8CP [Mapview hg19]  GOLGA8CP [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB085317 DQ597523
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GOLGA8CP
Cluster EST : UnigeneHs.592025 [ NCBI ]
CGAP (NCI)Hs.592025
Alternative Splicing GalleryENSG00000181984
Gene ExpressionGOLGA8CP [ NCBI-GEO ]   GOLGA8CP [ EBI - ARRAY_EXPRESS ]   GOLGA8CP [ SEEK ]   GOLGA8CP [ MEM ]
Gene Expression Viewer (FireBrowse)GOLGA8CP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)729786
GTEX Portal (Tissue expression)GOLGA8CP
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NN73   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NN73  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NN73
Splice isoforms : SwissVarA6NN73
PhosPhoSitePlusA6NN73
Domains : Interpro (EBI)Golgin_A   
Domain families : Pfam (Sanger)GOLGA2L5 (PF15070)   
Domain families : Pfam (NCBI)pfam15070   
Conserved Domain (NCBI)GOLGA8CP
DMDM Disease mutations729786
Blocks (Seattle)GOLGA8CP
SuperfamilyA6NN73
Human Protein AtlasENSG00000181984
Peptide AtlasA6NN73
IPIIPI01012395   
Protein Interaction databases
DIP (DOE-UCLA)A6NN73
IntAct (EBI)A6NN73
FunCoupENSG00000181984
BioGRIDGOLGA8CP
STRING (EMBL)GOLGA8CP
ZODIACGOLGA8CP
Ontologies - Pathways
QuickGOA6NN73
Ontology : AmiGOGolgi apparatus  
Ontology : EGO-EBIGolgi apparatus  
NDEx NetworkGOLGA8CP
Atlas of Cancer Signalling NetworkGOLGA8CP
Wikipedia pathwaysGOLGA8CP
Orthology - Evolution
OrthoDB729786
GeneTree (enSembl)ENSG00000181984
Phylogenetic Trees/Animal Genes : TreeFamGOLGA8CP
HOVERGENA6NN73
HOGENOMA6NN73
Homologs : HomoloGeneGOLGA8CP
Homology/Alignments : Family Browser (UCSC)GOLGA8CP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGOLGA8CP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GOLGA8CP
dbVarGOLGA8CP
ClinVarGOLGA8CP
1000_GenomesGOLGA8CP 
Exome Variant ServerGOLGA8CP
ExAC (Exome Aggregation Consortium)GOLGA8CP (select the gene name)
Genetic variants : HAPMAP729786
Genomic Variants (DGV)GOLGA8CP [DGVbeta]
DECIPHERGOLGA8CP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGOLGA8CP 
Mutations
ICGC Data PortalGOLGA8CP 
TCGA Data PortalGOLGA8CP 
Broad Tumor PortalGOLGA8CP
OASIS PortalGOLGA8CP [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDGOLGA8CP
BioMutasearch GOLGA8CP
DgiDB (Drug Gene Interaction Database)GOLGA8CP
DoCM (Curated mutations)GOLGA8CP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GOLGA8CP (select a term)
intoGenGOLGA8CP
Cancer3DGOLGA8CP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGOLGA8CP
Genetic Testing Registry GOLGA8CP
NextProtA6NN73 [Medical]
TSGene729786
GENETestsGOLGA8CP
Target ValidationGOLGA8CP
Huge Navigator GOLGA8CP [HugePedia]
snp3D : Map Gene to Disease729786
BioCentury BCIQGOLGA8CP
ClinGenGOLGA8CP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729786
Chemical/Pharm GKB GenePA142671718
Clinical trialGOLGA8CP
Miscellaneous
canSAR (ICR)GOLGA8CP (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGOLGA8CP
EVEXGOLGA8CP
GoPubMedGOLGA8CP
iHOPGOLGA8CP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:50:58 CEST 2017

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