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GOLGA8F (golgin A8 family member F)

Identity

Alias_namesgolgi autoantigen, golgin subfamily a, 8F
golgin A8 family, member F
Alias_symbol (synonym)DKFZp434P162
Other alias-
HGNC (Hugo) GOLGA8F
LocusID (NCBI) 100132565
Atlas_Id 63895
Location 15_KI270906v1_alt  [Link to chromosome band 15]
Location_base_pair Starts at 126931 and ends at 138279 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GOLGA8F   32378
Cards
Entrez_Gene (NCBI)GOLGA8F  100132565  golgin A8 family member F
Aliases
GeneCards (Weizmann)GOLGA8F
Ensembl hg19 (Hinxton)ENSG00000153684 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000153684 [Gene_View]  chr15_KI270906v1_alt:126931-138279 [Contig_View]  GOLGA8F [Vega]
ICGC DataPortalENSG00000153684
TCGA cBioPortalGOLGA8F
AceView (NCBI)GOLGA8F
Genatlas (Paris)GOLGA8F
WikiGenes100132565
SOURCE (Princeton)GOLGA8F
Genetics Home Reference (NIH)GOLGA8F
Genomic and cartography
GoldenPath hg38 (UCSC)GOLGA8F  -     chr15_KI270906v1_alt:126931-138279 +  15_KI270906v1_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GOLGA8F  -     15_KI270906v1_alt   [Description]    (hg19-Feb_2009)
EnsemblGOLGA8F - 15_KI270906v1_alt [CytoView hg19]  GOLGA8F - 15_KI270906v1_alt [CytoView hg38]
Mapping of homologs : NCBIGOLGA8F [Mapview hg19]  GOLGA8F [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057241 AK302625 AL833871 BC144672 BC150302
RefSeq transcript (Entrez)NM_001012452 NM_001164328 NM_001350920
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_187660 NW_003315943 NW_011332701
Consensus coding sequences : CCDS (NCBI)GOLGA8F
Cluster EST : UnigeneHs.592025 [ NCBI ]
CGAP (NCI)Hs.592025
Alternative Splicing GalleryENSG00000153684
Gene ExpressionGOLGA8F [ NCBI-GEO ]   GOLGA8F [ EBI - ARRAY_EXPRESS ]   GOLGA8F [ SEEK ]   GOLGA8F [ MEM ]
Gene Expression Viewer (FireBrowse)GOLGA8F [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100132565
GTEX Portal (Tissue expression)GOLGA8F
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ08AF8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ08AF8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ08AF8
Splice isoforms : SwissVarQ08AF8
PhosPhoSitePlusQ08AF8
Domains : Interpro (EBI)Golgin_A   
Domain families : Pfam (Sanger)GOLGA2L5 (PF15070)   
Domain families : Pfam (NCBI)pfam15070   
Conserved Domain (NCBI)GOLGA8F
DMDM Disease mutations100132565
Blocks (Seattle)GOLGA8F
SuperfamilyQ08AF8
Human Protein AtlasENSG00000153684
Peptide AtlasQ08AF8
Protein Interaction databases
DIP (DOE-UCLA)Q08AF8
IntAct (EBI)Q08AF8
FunCoupENSG00000153684
BioGRIDGOLGA8F
STRING (EMBL)GOLGA8F
ZODIACGOLGA8F
Ontologies - Pathways
QuickGOQ08AF8
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkGOLGA8F
Atlas of Cancer Signalling NetworkGOLGA8F
Wikipedia pathwaysGOLGA8F
Orthology - Evolution
OrthoDB100132565
GeneTree (enSembl)ENSG00000153684
Phylogenetic Trees/Animal Genes : TreeFamGOLGA8F
HOVERGENQ08AF8
HOGENOMQ08AF8
Homologs : HomoloGeneGOLGA8F
Homology/Alignments : Family Browser (UCSC)GOLGA8F
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGOLGA8F [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GOLGA8F
dbVarGOLGA8F
ClinVarGOLGA8F
1000_GenomesGOLGA8F 
Exome Variant ServerGOLGA8F
ExAC (Exome Aggregation Consortium)GOLGA8F (select the gene name)
Genetic variants : HAPMAP100132565
Genomic Variants (DGV)GOLGA8F [DGVbeta]
DECIPHERGOLGA8F [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGOLGA8F 
Mutations
ICGC Data PortalGOLGA8F 
TCGA Data PortalGOLGA8F 
Broad Tumor PortalGOLGA8F
OASIS PortalGOLGA8F [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGOLGA8F  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGOLGA8F
BioMutasearch GOLGA8F
DgiDB (Drug Gene Interaction Database)GOLGA8F
DoCM (Curated mutations)GOLGA8F (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GOLGA8F (select a term)
intoGenGOLGA8F
Cancer3DGOLGA8F(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGOLGA8F
Genetic Testing Registry GOLGA8F
NextProtQ08AF8 [Medical]
TSGene100132565
GENETestsGOLGA8F
Target ValidationGOLGA8F
Huge Navigator GOLGA8F [HugePedia]
snp3D : Map Gene to Disease100132565
BioCentury BCIQGOLGA8F
ClinGenGOLGA8F
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100132565
Chemical/Pharm GKB GenePA142671721
Clinical trialGOLGA8F
Miscellaneous
canSAR (ICR)GOLGA8F (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGOLGA8F
EVEXGOLGA8F
GoPubMedGOLGA8F
iHOPGOLGA8F
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:50:59 CEST 2017

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