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GOLGA8H (golgin A8 family member H)

Identity

Alias_namesgolgin A8 family, member H
Alias_symbol (synonym)GOLGA6L11
Other alias
HGNC (Hugo) GOLGA8H
LocusID (NCBI) 728498
Atlas_Id 63897
Location 15q13.2  [Link to chromosome band 15q13]
Location_base_pair Starts at 30604030 and ends at 30617826 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GOLGA8H   37443
Cards
Entrez_Gene (NCBI)GOLGA8H  728498  golgin A8 family member H
AliasesGOLGA6L11
GeneCards (Weizmann)GOLGA8H
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:30604030-30617826 [Contig_View]  GOLGA8H [Vega]
TCGA cBioPortalGOLGA8H
AceView (NCBI)GOLGA8H
Genatlas (Paris)GOLGA8H
WikiGenes728498
SOURCE (Princeton)GOLGA8H
Genetics Home Reference (NIH)GOLGA8H
Genomic and cartography
GoldenPath hg38 (UCSC)GOLGA8H  -     chr15:30604030-30617826 +  15q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GOLGA8H  -     15q13.2   [Description]    (hg19-Feb_2009)
EnsemblGOLGA8H - 15q13.2 [CytoView hg19]  GOLGA8H - 15q13.2 [CytoView hg38]
Mapping of homologs : NCBIGOLGA8H [Mapview hg19]  GOLGA8H [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001282490
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_187660 NW_011332701 NW_012132920
Consensus coding sequences : CCDS (NCBI)GOLGA8H
Gene ExpressionGOLGA8H [ NCBI-GEO ]   GOLGA8H [ EBI - ARRAY_EXPRESS ]   GOLGA8H [ SEEK ]   GOLGA8H [ MEM ]
Gene Expression Viewer (FireBrowse)GOLGA8H [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)728498
GTEX Portal (Tissue expression)GOLGA8H
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0CJ92   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0CJ92  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0CJ92
Splice isoforms : SwissVarP0CJ92
PhosPhoSitePlusP0CJ92
Domains : Interpro (EBI)Golgin_A   
Domain families : Pfam (Sanger)GOLGA2L5 (PF15070)   
Domain families : Pfam (NCBI)pfam15070   
Conserved Domain (NCBI)GOLGA8H
DMDM Disease mutations728498
Blocks (Seattle)GOLGA8H
SuperfamilyP0CJ92
Peptide AtlasP0CJ92
IPIIPI00969160   IPI00936687   
Protein Interaction databases
DIP (DOE-UCLA)P0CJ92
IntAct (EBI)P0CJ92
BioGRIDGOLGA8H
STRING (EMBL)GOLGA8H
ZODIACGOLGA8H
Ontologies - Pathways
QuickGOP0CJ92
Ontology : AmiGOGolgi apparatus  
Ontology : EGO-EBIGolgi apparatus  
NDEx NetworkGOLGA8H
Atlas of Cancer Signalling NetworkGOLGA8H
Wikipedia pathwaysGOLGA8H
Orthology - Evolution
OrthoDB728498
Phylogenetic Trees/Animal Genes : TreeFamGOLGA8H
HOVERGENP0CJ92
HOGENOMP0CJ92
Homologs : HomoloGeneGOLGA8H
Homology/Alignments : Family Browser (UCSC)GOLGA8H
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGOLGA8H [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GOLGA8H
dbVarGOLGA8H
ClinVarGOLGA8H
1000_GenomesGOLGA8H 
Exome Variant ServerGOLGA8H
ExAC (Exome Aggregation Consortium)GOLGA8H (select the gene name)
Genetic variants : HAPMAP728498
Genomic Variants (DGV)GOLGA8H [DGVbeta]
DECIPHERGOLGA8H [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGOLGA8H 
Mutations
ICGC Data PortalGOLGA8H 
TCGA Data PortalGOLGA8H 
Broad Tumor PortalGOLGA8H
OASIS PortalGOLGA8H [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGOLGA8H  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGOLGA8H
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GOLGA8H
DgiDB (Drug Gene Interaction Database)GOLGA8H
DoCM (Curated mutations)GOLGA8H (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GOLGA8H (select a term)
intoGenGOLGA8H
Cancer3DGOLGA8H(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGOLGA8H
Genetic Testing Registry GOLGA8H
NextProtP0CJ92 [Medical]
TSGene728498
GENETestsGOLGA8H
Target ValidationGOLGA8H
Huge Navigator GOLGA8H [HugePedia]
snp3D : Map Gene to Disease728498
BioCentury BCIQGOLGA8H
ClinGenGOLGA8H
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728498
Chemical/Pharm GKB GenePA165478923
Clinical trialGOLGA8H
Miscellaneous
canSAR (ICR)GOLGA8H (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGOLGA8H
EVEXGOLGA8H
GoPubMedGOLGA8H
iHOPGOLGA8H
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:09:37 CEST 2017

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