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GOLGA8J (golgin A8 family, member J)

Identity

Alias_namesgolgin A8 family, member J
Other alias-
HGNC (Hugo) GOLGA8J
LocusID (NCBI) 653073
Atlas_Id 63899
Location 15q13.2  [Link to chromosome band 15q13]
Location_base_pair Starts at 30375158 and ends at 30388904 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GOLGA8J   38650
Cards
Entrez_Gene (NCBI)GOLGA8J  653073  golgin A8 family, member J
Aliases
GeneCards (Weizmann)GOLGA8J
Ensembl hg19 (Hinxton) [Gene_View]  chr15:30375158-30388904 [Contig_View]  GOLGA8J [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:30375158-30388904 [Contig_View]  GOLGA8J [Vega]
TCGA cBioPortalGOLGA8J
AceView (NCBI)GOLGA8J
Genatlas (Paris)GOLGA8J
WikiGenes653073
SOURCE (Princeton)GOLGA8J
Genetics Home Reference (NIH)GOLGA8J
Genomic and cartography
GoldenPath hg19 (UCSC)GOLGA8J  -     chr15:30375158-30388904 +  15q13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GOLGA8J  -     15q13.2   [Description]    (hg38-Dec_2013)
EnsemblGOLGA8J - 15q13.2 [CytoView hg19]  GOLGA8J - 15q13.2 [CytoView hg38]
Mapping of homologs : NCBIGOLGA8J [Mapview hg19]  GOLGA8J [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK302171 DB054802 DB098469
RefSeq transcript (Entrez)NM_001282472
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_010194 NT_187660 NW_004929398 NW_011332701
Consensus coding sequences : CCDS (NCBI)GOLGA8J
Cluster EST : UnigeneHs.649690 [ NCBI ]
CGAP (NCI)Hs.649690
Gene ExpressionGOLGA8J [ NCBI-GEO ]   GOLGA8J [ EBI - ARRAY_EXPRESS ]   GOLGA8J [ SEEK ]   GOLGA8J [ MEM ]
Gene Expression Viewer (FireBrowse)GOLGA8J [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)653073
GTEX Portal (Tissue expression)GOLGA8J
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NMD2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NMD2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NMD2
Splice isoforms : SwissVarA6NMD2
PhosPhoSitePlusA6NMD2
Domains : Interpro (EBI)Golgin_A   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GOLGA8J
DMDM Disease mutations653073
Blocks (Seattle)GOLGA8J
SuperfamilyA6NMD2
Peptide AtlasA6NMD2
IPIIPI00742083   IPI00937683   IPI00930662   
Protein Interaction databases
DIP (DOE-UCLA)A6NMD2
IntAct (EBI)A6NMD2
BioGRIDGOLGA8J
STRING (EMBL)GOLGA8J
ZODIACGOLGA8J
Ontologies - Pathways
QuickGOA6NMD2
Ontology : AmiGOGolgi apparatus  
Ontology : EGO-EBIGolgi apparatus  
NDEx NetworkGOLGA8J
Atlas of Cancer Signalling NetworkGOLGA8J
Wikipedia pathwaysGOLGA8J
Orthology - Evolution
OrthoDB653073
Phylogenetic Trees/Animal Genes : TreeFamGOLGA8J
HOVERGENA6NMD2
HOGENOMA6NMD2
Homologs : HomoloGeneGOLGA8J
Homology/Alignments : Family Browser (UCSC)GOLGA8J
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGOLGA8J [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GOLGA8J
dbVarGOLGA8J
ClinVarGOLGA8J
1000_GenomesGOLGA8J 
Exome Variant ServerGOLGA8J
ExAC (Exome Aggregation Consortium)GOLGA8J (select the gene name)
Genetic variants : HAPMAP653073
Genomic Variants (DGV)GOLGA8J [DGVbeta]
DECIPHER (Syndromes)15:30375158-30388904  
CONAN: Copy Number AnalysisGOLGA8J 
Mutations
ICGC Data PortalGOLGA8J 
TCGA Data PortalGOLGA8J 
Broad Tumor PortalGOLGA8J
OASIS PortalGOLGA8J [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGOLGA8J  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGOLGA8J
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GOLGA8J
DgiDB (Drug Gene Interaction Database)GOLGA8J
DoCM (Curated mutations)GOLGA8J (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GOLGA8J (select a term)
intoGenGOLGA8J
Cancer3DGOLGA8J(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGOLGA8J
Genetic Testing Registry GOLGA8J
NextProtA6NMD2 [Medical]
TSGene653073
GENETestsGOLGA8J
Huge Navigator GOLGA8J [HugePedia]
snp3D : Map Gene to Disease653073
BioCentury BCIQGOLGA8J
ClinGenGOLGA8J
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD653073
Chemical/Pharm GKB GenePA165478975
Clinical trialGOLGA8J
Miscellaneous
canSAR (ICR)GOLGA8J (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGOLGA8J
EVEXGOLGA8J
GoPubMedGOLGA8J
iHOPGOLGA8J
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:06:29 CET 2017

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