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GOLGA8M (golgin A8 family member M)

Identity

Alias_namesgolgin A8 family, member M
Other alias-
HGNC (Hugo) GOLGA8M
LocusID (NCBI) 653720
Atlas_Id 63901
Location 15q13.1  [Link to chromosome band 15q13]
Location_base_pair Starts at 28698696 and ends at 28712421 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GOLGA8M   44404
Cards
Entrez_Gene (NCBI)GOLGA8M  653720  golgin A8 family member M
Aliases
GeneCards (Weizmann)GOLGA8M
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:28698696-28712421 [Contig_View]  GOLGA8M [Vega]
TCGA cBioPortalGOLGA8M
AceView (NCBI)GOLGA8M
Genatlas (Paris)GOLGA8M
WikiGenes653720
SOURCE (Princeton)GOLGA8M
Genetics Home Reference (NIH)GOLGA8M
Genomic and cartography
GoldenPath hg38 (UCSC)GOLGA8M  -     chr15:28698696-28712421 -  15q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GOLGA8M  -     15q13.1   [Description]    (hg19-Feb_2009)
EnsemblGOLGA8M - 15q13.1 [CytoView hg19]  GOLGA8M - 15q13.1 [CytoView hg38]
Mapping of homologs : NCBIGOLGA8M [Mapview hg19]  GOLGA8M [Mapview hg38]
Gene and transcription
Genbank (Entrez)BF087405 BQ004100
RefSeq transcript (Entrez)NM_001282468
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_187660 NW_011332701
Consensus coding sequences : CCDS (NCBI)GOLGA8M
Cluster EST : UnigeneHs.743947 [ NCBI ]
CGAP (NCI)Hs.743947
Gene ExpressionGOLGA8M [ NCBI-GEO ]   GOLGA8M [ EBI - ARRAY_EXPRESS ]   GOLGA8M [ SEEK ]   GOLGA8M [ MEM ]
Gene Expression Viewer (FireBrowse)GOLGA8M [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)653720
GTEX Portal (Tissue expression)GOLGA8M
Protein : pattern, domain, 3D structure
UniProt/SwissProtH3BSY2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtH3BSY2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProH3BSY2
Splice isoforms : SwissVarH3BSY2
PhosPhoSitePlusH3BSY2
Domains : Interpro (EBI)Golgin_A   
Domain families : Pfam (Sanger)GOLGA2L5 (PF15070)   
Domain families : Pfam (NCBI)pfam15070   
Conserved Domain (NCBI)GOLGA8M
DMDM Disease mutations653720
Blocks (Seattle)GOLGA8M
SuperfamilyH3BSY2
Peptide AtlasH3BSY2
IPIIPI00513809   IPI01024983   IPI00981567   IPI00980684   
Protein Interaction databases
DIP (DOE-UCLA)H3BSY2
IntAct (EBI)H3BSY2
BioGRIDGOLGA8M
STRING (EMBL)GOLGA8M
ZODIACGOLGA8M
Ontologies - Pathways
QuickGOH3BSY2
Ontology : AmiGOGolgi apparatus  
Ontology : EGO-EBIGolgi apparatus  
NDEx NetworkGOLGA8M
Atlas of Cancer Signalling NetworkGOLGA8M
Wikipedia pathwaysGOLGA8M
Orthology - Evolution
OrthoDB653720
Phylogenetic Trees/Animal Genes : TreeFamGOLGA8M
HOVERGENH3BSY2
HOGENOMH3BSY2
Homologs : HomoloGeneGOLGA8M
Homology/Alignments : Family Browser (UCSC)GOLGA8M
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGOLGA8M [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GOLGA8M
dbVarGOLGA8M
ClinVarGOLGA8M
1000_GenomesGOLGA8M 
Exome Variant ServerGOLGA8M
ExAC (Exome Aggregation Consortium)GOLGA8M (select the gene name)
Genetic variants : HAPMAP653720
Genomic Variants (DGV)GOLGA8M [DGVbeta]
DECIPHERGOLGA8M [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGOLGA8M 
Mutations
ICGC Data PortalGOLGA8M 
TCGA Data PortalGOLGA8M 
Broad Tumor PortalGOLGA8M
OASIS PortalGOLGA8M [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGOLGA8M  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGOLGA8M
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GOLGA8M
DgiDB (Drug Gene Interaction Database)GOLGA8M
DoCM (Curated mutations)GOLGA8M (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GOLGA8M (select a term)
intoGenGOLGA8M
Cancer3DGOLGA8M(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGOLGA8M
Genetic Testing Registry GOLGA8M
NextProtH3BSY2 [Medical]
TSGene653720
GENETestsGOLGA8M
Target ValidationGOLGA8M
Huge Navigator GOLGA8M [HugePedia]
snp3D : Map Gene to Disease653720
BioCentury BCIQGOLGA8M
ClinGenGOLGA8M
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD653720
Chemical/Pharm GKB GenePA166049124
Clinical trialGOLGA8M
Miscellaneous
canSAR (ICR)GOLGA8M (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGOLGA8M
EVEXGOLGA8M
GoPubMedGOLGA8M
iHOPGOLGA8M
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:09:37 CEST 2017

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