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GOLGA8N (golgin A8 family member N)

Identity

Alias_namesgolgin A8 family, member N
Other aliasGOLGA8R
HGNC (Hugo) GOLGA8N
LocusID (NCBI) 643699
Atlas_Id 63902
Location 15q13.2  [Link to chromosome band 15q13]
Location_base_pair Starts at 30604030 and ends at 30617900 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GOLGA8N   44405
Cards
Entrez_Gene (NCBI)GOLGA8N  643699  golgin A8 family member N
AliasesGOLGA8R
GeneCards (Weizmann)GOLGA8N
Ensembl hg19 (Hinxton)ENSG00000232653 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232653 [Gene_View]  chr15:30604030-30617900 [Contig_View]  GOLGA8N [Vega]
ICGC DataPortalENSG00000232653
TCGA cBioPortalGOLGA8N
AceView (NCBI)GOLGA8N
Genatlas (Paris)GOLGA8N
WikiGenes643699
SOURCE (Princeton)GOLGA8N
Genetics Home Reference (NIH)GOLGA8N
Genomic and cartography
GoldenPath hg38 (UCSC)GOLGA8N  -     chr15:30604030-30617900 +  15q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GOLGA8N  -     15q13.2   [Description]    (hg19-Feb_2009)
EnsemblGOLGA8N - 15q13.2 [CytoView hg19]  GOLGA8N - 15q13.2 [CytoView hg38]
Mapping of homologs : NCBIGOLGA8N [Mapview hg19]  GOLGA8N [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK310041 BC101292
RefSeq transcript (Entrez)NM_001282494
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_187660 NW_011332701 NW_012132920
Consensus coding sequences : CCDS (NCBI)GOLGA8N
Cluster EST : UnigeneHs.672754 [ NCBI ]
CGAP (NCI)Hs.672754
Alternative Splicing GalleryENSG00000232653
Gene ExpressionGOLGA8N [ NCBI-GEO ]   GOLGA8N [ EBI - ARRAY_EXPRESS ]   GOLGA8N [ SEEK ]   GOLGA8N [ MEM ]
Gene Expression Viewer (FireBrowse)GOLGA8N [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)643699
GTEX Portal (Tissue expression)GOLGA8N
Protein : pattern, domain, 3D structure
UniProt/SwissProtF8WBI6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtF8WBI6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProF8WBI6
Splice isoforms : SwissVarF8WBI6
PhosPhoSitePlusF8WBI6
Domains : Interpro (EBI)Golgin_A   
Domain families : Pfam (Sanger)GOLGA2L5 (PF15070)   
Domain families : Pfam (NCBI)pfam15070   
Conserved Domain (NCBI)GOLGA8N
DMDM Disease mutations643699
Blocks (Seattle)GOLGA8N
SuperfamilyF8WBI6
Human Protein AtlasENSG00000232653
Peptide AtlasF8WBI6
IPIIPI00788140   
Protein Interaction databases
DIP (DOE-UCLA)F8WBI6
IntAct (EBI)F8WBI6
FunCoupENSG00000232653
BioGRIDGOLGA8N
STRING (EMBL)GOLGA8N
ZODIACGOLGA8N
Ontologies - Pathways
QuickGOF8WBI6
Ontology : AmiGOGolgi apparatus  
Ontology : EGO-EBIGolgi apparatus  
NDEx NetworkGOLGA8N
Atlas of Cancer Signalling NetworkGOLGA8N
Wikipedia pathwaysGOLGA8N
Orthology - Evolution
OrthoDB643699
GeneTree (enSembl)ENSG00000232653
Phylogenetic Trees/Animal Genes : TreeFamGOLGA8N
HOVERGENF8WBI6
HOGENOMF8WBI6
Homologs : HomoloGeneGOLGA8N
Homology/Alignments : Family Browser (UCSC)GOLGA8N
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGOLGA8N [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GOLGA8N
dbVarGOLGA8N
ClinVarGOLGA8N
1000_GenomesGOLGA8N 
Exome Variant ServerGOLGA8N
ExAC (Exome Aggregation Consortium)GOLGA8N (select the gene name)
Genetic variants : HAPMAP643699
Genomic Variants (DGV)GOLGA8N [DGVbeta]
DECIPHERGOLGA8N [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGOLGA8N 
Mutations
ICGC Data PortalGOLGA8N 
TCGA Data PortalGOLGA8N 
Broad Tumor PortalGOLGA8N
OASIS PortalGOLGA8N [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGOLGA8N  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGOLGA8N
BioMutasearch GOLGA8N
DgiDB (Drug Gene Interaction Database)GOLGA8N
DoCM (Curated mutations)GOLGA8N (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GOLGA8N (select a term)
intoGenGOLGA8N
Cancer3DGOLGA8N(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGOLGA8N
Genetic Testing Registry GOLGA8N
NextProtF8WBI6 [Medical]
TSGene643699
GENETestsGOLGA8N
Target ValidationGOLGA8N
Huge Navigator GOLGA8N [HugePedia]
snp3D : Map Gene to Disease643699
BioCentury BCIQGOLGA8N
ClinGenGOLGA8N
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD643699
Chemical/Pharm GKB GenePA166049125
Clinical trialGOLGA8N
Miscellaneous
canSAR (ICR)GOLGA8N (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGOLGA8N
EVEXGOLGA8N
GoPubMedGOLGA8N
iHOPGOLGA8N
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:51:00 CEST 2017

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