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GOLM1 (golgi membrane protein 1)

Identity

Alias_namesGOLPH2
C9orf155
golgi phosphoprotein 2
chromosome 9 open reading frame 155
Alias_symbol (synonym)GP73
FLJ23608
bA379P1.3
Other aliasHEL46
PSEC0257
HGNC (Hugo) GOLM1
LocusID (NCBI) 51280
Atlas_Id 49952
Location 9q21.33  [Link to chromosome band 9q21]
Location_base_pair Starts at 86026143 and ends at 86099595 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GOLM1 (9q21.33) / GOLM1 (9q21.33)GOLM1 (9q21.33) / UHMK1 (1q23.3)RGS3 (9q32) / GOLM1 (9q21.33)
TMEM245 (9q31.3) / GOLM1 (9q21.33)VAT1 (17q21.31) / GOLM1 (9q21.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GOLM1   15451
Cards
Entrez_Gene (NCBI)GOLM1  51280  golgi membrane protein 1
AliasesC9orf155; GOLPH2; GP73; HEL46; 
PSEC0257; bA379P1.3
GeneCards (Weizmann)GOLM1
Ensembl hg19 (Hinxton)ENSG00000135052 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000135052 [Gene_View]  chr9:86026143-86099595 [Contig_View]  GOLM1 [Vega]
ICGC DataPortalENSG00000135052
TCGA cBioPortalGOLM1
AceView (NCBI)GOLM1
Genatlas (Paris)GOLM1
WikiGenes51280
SOURCE (Princeton)GOLM1
Genetics Home Reference (NIH)GOLM1
Genomic and cartography
GoldenPath hg38 (UCSC)GOLM1  -     chr9:86026143-86099595 -  9q21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GOLM1  -     9q21.33   [Description]    (hg19-Feb_2009)
EnsemblGOLM1 - 9q21.33 [CytoView hg19]  GOLM1 - 9q21.33 [CytoView hg38]
Mapping of homologs : NCBIGOLM1 [Mapview hg19]  GOLM1 [Mapview hg38]
OMIM606804   
Gene and transcription
Genbank (Entrez)AF236056 AI929234 AJ420432 AK027717 AK074188
RefSeq transcript (Entrez)NM_001099268 NM_016548 NM_177937
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GOLM1
Cluster EST : UnigeneHs.494337 [ NCBI ]
CGAP (NCI)Hs.494337
Alternative Splicing GalleryENSG00000135052
Gene ExpressionGOLM1 [ NCBI-GEO ]   GOLM1 [ EBI - ARRAY_EXPRESS ]   GOLM1 [ SEEK ]   GOLM1 [ MEM ]
Gene Expression Viewer (FireBrowse)GOLM1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51280
GTEX Portal (Tissue expression)GOLM1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NBJ4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NBJ4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NBJ4
Splice isoforms : SwissVarQ8NBJ4
PhosPhoSitePlusQ8NBJ4
Domains : Interpro (EBI)GOLM1    GOLM1/CASC4   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GOLM1
DMDM Disease mutations51280
Blocks (Seattle)GOLM1
SuperfamilyQ8NBJ4
Human Protein AtlasENSG00000135052
Peptide AtlasQ8NBJ4
HPRD08428
IPIIPI00759659   IPI00171411   IPI00640107   IPI00947314   IPI00944917   IPI00945487   IPI00947049   
Protein Interaction databases
DIP (DOE-UCLA)Q8NBJ4
IntAct (EBI)Q8NBJ4
FunCoupENSG00000135052
BioGRIDGOLM1
STRING (EMBL)GOLM1
ZODIACGOLM1
Ontologies - Pathways
QuickGOQ8NBJ4
Ontology : AmiGOprotein binding  extracellular space  Golgi apparatus  integral component of plasma membrane  nucleus organization  regulation of lipid metabolic process  extracellular exosome  
Ontology : EGO-EBIprotein binding  extracellular space  Golgi apparatus  integral component of plasma membrane  nucleus organization  regulation of lipid metabolic process  extracellular exosome  
NDEx NetworkGOLM1
Atlas of Cancer Signalling NetworkGOLM1
Wikipedia pathwaysGOLM1
Orthology - Evolution
OrthoDB51280
GeneTree (enSembl)ENSG00000135052
Phylogenetic Trees/Animal Genes : TreeFamGOLM1
HOVERGENQ8NBJ4
HOGENOMQ8NBJ4
Homologs : HomoloGeneGOLM1
Homology/Alignments : Family Browser (UCSC)GOLM1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGOLM1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GOLM1
dbVarGOLM1
ClinVarGOLM1
1000_GenomesGOLM1 
Exome Variant ServerGOLM1
ExAC (Exome Aggregation Consortium)GOLM1 (select the gene name)
Genetic variants : HAPMAP51280
Genomic Variants (DGV)GOLM1 [DGVbeta]
DECIPHERGOLM1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGOLM1 
Mutations
ICGC Data PortalGOLM1 
TCGA Data PortalGOLM1 
Broad Tumor PortalGOLM1
OASIS PortalGOLM1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGOLM1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGOLM1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GOLM1
DgiDB (Drug Gene Interaction Database)GOLM1
DoCM (Curated mutations)GOLM1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GOLM1 (select a term)
intoGenGOLM1
Cancer3DGOLM1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606804   
Orphanet
MedgenGOLM1
Genetic Testing Registry GOLM1
NextProtQ8NBJ4 [Medical]
TSGene51280
GENETestsGOLM1
Target ValidationGOLM1
Huge Navigator GOLM1 [HugePedia]
snp3D : Map Gene to Disease51280
BioCentury BCIQGOLM1
ClinGenGOLM1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51280
Chemical/Pharm GKB GenePA28811
Clinical trialGOLM1
Miscellaneous
canSAR (ICR)GOLM1 (select the gene name)
Probes
Litterature
PubMed87 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGOLM1
EVEXGOLM1
GoPubMedGOLM1
iHOPGOLM1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:35:40 CEST 2017

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