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GORASP1 (golgi reassembly stacking protein 1)

Identity

Other aliasGOLPH5
GRASP65
P65
HGNC (Hugo) GORASP1
LocusID (NCBI) 64689
Atlas_Id 56688
Location 3p22.2  [Link to chromosome band 3p22]
Location_base_pair Starts at 39138090 and ends at 39149391 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
GORASP1 (3p22.2) / GORASP1 (3p22.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GORASP1   16769
Cards
Entrez_Gene (NCBI)GORASP1  64689  golgi reassembly stacking protein 1
AliasesGOLPH5; GRASP65; P65
GeneCards (Weizmann)GORASP1
Ensembl hg19 (Hinxton) [Gene_View]  chr3:39138090-39149391 [Contig_View]  GORASP1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:39138090-39149391 [Contig_View]  GORASP1 [Vega]
TCGA cBioPortalGORASP1
AceView (NCBI)GORASP1
Genatlas (Paris)GORASP1
WikiGenes64689
SOURCE (Princeton)GORASP1
Genetics Home Reference (NIH)GORASP1
Genomic and cartography
GoldenPath hg19 (UCSC)GORASP1  -     chr3:39138090-39149391 -  3p22.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GORASP1  -     3p22.2   [Description]    (hg38-Dec_2013)
EnsemblGORASP1 - 3p22.2 [CytoView hg19]  GORASP1 - 3p22.2 [CytoView hg38]
Mapping of homologs : NCBIGORASP1 [Mapview hg19]  GORASP1 [Mapview hg38]
OMIM606867   
Gene and transcription
Genbank (Entrez)AI824080 AJ409349 AK001574 AK027096 AK057043
RefSeq transcript (Entrez)NM_001278789 NM_001278790 NM_031899
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GORASP1
Cluster EST : UnigeneHs.721946 [ NCBI ]
CGAP (NCI)Hs.721946
Gene ExpressionGORASP1 [ NCBI-GEO ]   GORASP1 [ EBI - ARRAY_EXPRESS ]   GORASP1 [ SEEK ]   GORASP1 [ MEM ]
Gene Expression Viewer (FireBrowse)GORASP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64689
GTEX Portal (Tissue expression)GORASP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BQQ3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BQQ3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BQQ3
Splice isoforms : SwissVarQ9BQQ3
PhosPhoSitePlusQ9BQQ3
Domains : Interpro (EBI)GRASP55/65_PDZ    GRASP55_65    PDZ   
Domain families : Pfam (Sanger)GRASP55_65 (PF04495)   
Domain families : Pfam (NCBI)pfam04495   
Conserved Domain (NCBI)GORASP1
DMDM Disease mutations64689
Blocks (Seattle)GORASP1
PDB (SRS)4REY   
PDB (PDBSum)4REY   
PDB (IMB)4REY   
PDB (RSDB)4REY   
Structural Biology KnowledgeBase4REY   
SCOP (Structural Classification of Proteins)4REY   
CATH (Classification of proteins structures)4REY   
SuperfamilyQ9BQQ3
Peptide AtlasQ9BQQ3
IPIIPI00011074   IPI00456615   IPI00456616   IPI00790902   IPI00924953   IPI00796304   IPI00924764   IPI01017892   IPI00927125   IPI00926605   IPI00926826   IPI00926998   IPI00926571   
Protein Interaction databases
DIP (DOE-UCLA)Q9BQQ3
IntAct (EBI)Q9BQQ3
BioGRIDGORASP1
STRING (EMBL)GORASP1
ZODIACGORASP1
Ontologies - Pathways
QuickGOQ9BQQ3
Ontology : AmiGOGolgi membrane  protein binding  Golgi apparatus  protein N-linked glycosylation  ER to Golgi vesicle-mediated transport  Golgi organization  Golgi organization  protein transport  endoplasmic reticulum-Golgi intermediate compartment membrane  COPII vesicle coating  negative regulation of dendrite morphogenesis  
Ontology : EGO-EBIGolgi membrane  protein binding  Golgi apparatus  protein N-linked glycosylation  ER to Golgi vesicle-mediated transport  Golgi organization  Golgi organization  protein transport  endoplasmic reticulum-Golgi intermediate compartment membrane  COPII vesicle coating  negative regulation of dendrite morphogenesis  
NDEx NetworkGORASP1
Atlas of Cancer Signalling NetworkGORASP1
Wikipedia pathwaysGORASP1
Orthology - Evolution
OrthoDB64689
Phylogenetic Trees/Animal Genes : TreeFamGORASP1
HOVERGENQ9BQQ3
HOGENOMQ9BQQ3
Homologs : HomoloGeneGORASP1
Homology/Alignments : Family Browser (UCSC)GORASP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGORASP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GORASP1
dbVarGORASP1
ClinVarGORASP1
1000_GenomesGORASP1 
Exome Variant ServerGORASP1
ExAC (Exome Aggregation Consortium)GORASP1 (select the gene name)
Genetic variants : HAPMAP64689
Genomic Variants (DGV)GORASP1 [DGVbeta]
DECIPHER (Syndromes)3:39138090-39149391  
CONAN: Copy Number AnalysisGORASP1 
Mutations
ICGC Data PortalGORASP1 
TCGA Data PortalGORASP1 
Broad Tumor PortalGORASP1
OASIS PortalGORASP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGORASP1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGORASP1
BioMutasearch GORASP1
DgiDB (Drug Gene Interaction Database)GORASP1
DoCM (Curated mutations)GORASP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GORASP1 (select a term)
intoGenGORASP1
Cancer3DGORASP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606867   
Orphanet
MedgenGORASP1
Genetic Testing Registry GORASP1
NextProtQ9BQQ3 [Medical]
TSGene64689
GENETestsGORASP1
Huge Navigator GORASP1 [HugePedia]
snp3D : Map Gene to Disease64689
BioCentury BCIQGORASP1
ClinGenGORASP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64689
Chemical/Pharm GKB GenePA28814
Clinical trialGORASP1
Miscellaneous
canSAR (ICR)GORASP1 (select the gene name)
Probes
Litterature
PubMed48 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGORASP1
EVEXGORASP1
GoPubMedGORASP1
iHOPGORASP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:02:47 CEST 2017

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