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GORASP2 (golgi reassembly stacking protein 2)

Identity

Alias_namesgolgi reassembly stacking protein 2, 55 kDa
golgi reassembly stacking protein 2, 55kDa
Alias_symbol (synonym)GRASP55
GRS2
GOLPH6
Other aliasp59
HGNC (Hugo) GORASP2
LocusID (NCBI) 26003
Atlas_Id 54338
Location 2q31.1  [Link to chromosome band 2q31]
Location_base_pair Starts at 170928438 and ends at 170967133 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
COL1A1 (17q21.33) / GORASP2 (2q31.1)FNDC3B (3q26.31) / GORASP2 (2q31.1)GORASP2 (2q31.1) / AC007405.7 ()
GORASP2 (2q31.1) / ESYT2 (7q36.3)GORASP2 (2q31.1) / GORASP2 (2q31.1)GORASP2 (2q31.1) / LDHA (11p15.1)
GORASP2 (2q31.1) / TIAM2 (6q25.3)GORASP2 (2q31.1) / WIPF1 (2q31.1)GORASP2 2q31.1 AC007405.7
GORASP2 2q31.1 / WIPF1 2q31.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GORASP2   17500
Cards
Entrez_Gene (NCBI)GORASP2  26003  golgi reassembly stacking protein 2
AliasesGOLPH6; GRASP55; GRS2; p59
GeneCards (Weizmann)GORASP2
Ensembl hg19 (Hinxton)ENSG00000115806 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000115806 [Gene_View]  chr2:170928438-170967133 [Contig_View]  GORASP2 [Vega]
ICGC DataPortalENSG00000115806
TCGA cBioPortalGORASP2
AceView (NCBI)GORASP2
Genatlas (Paris)GORASP2
WikiGenes26003
SOURCE (Princeton)GORASP2
Genetics Home Reference (NIH)GORASP2
Genomic and cartography
GoldenPath hg38 (UCSC)GORASP2  -     chr2:170928438-170967133 +  2q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GORASP2  -     2q31.1   [Description]    (hg19-Feb_2009)
EnsemblGORASP2 - 2q31.1 [CytoView hg19]  GORASP2 - 2q31.1 [CytoView hg38]
Mapping of homologs : NCBIGORASP2 [Mapview hg19]  GORASP2 [Mapview hg38]
OMIM608693   
Gene and transcription
Genbank (Entrez)AI052563 AK023082 AK023201 AK027202 AK027349
RefSeq transcript (Entrez)NM_001201428 NM_015530
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GORASP2
Cluster EST : UnigeneHs.431317 [ NCBI ]
CGAP (NCI)Hs.431317
Alternative Splicing GalleryENSG00000115806
Gene ExpressionGORASP2 [ NCBI-GEO ]   GORASP2 [ EBI - ARRAY_EXPRESS ]   GORASP2 [ SEEK ]   GORASP2 [ MEM ]
Gene Expression Viewer (FireBrowse)GORASP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26003
GTEX Portal (Tissue expression)GORASP2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H8Y8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H8Y8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H8Y8
Splice isoforms : SwissVarQ9H8Y8
PhosPhoSitePlusQ9H8Y8
Domains : Interpro (EBI)GRASP55/65_PDZ    GRASP55_65    PDZ   
Domain families : Pfam (Sanger)GRASP55_65 (PF04495)   
Domain families : Pfam (NCBI)pfam04495   
Conserved Domain (NCBI)GORASP2
DMDM Disease mutations26003
Blocks (Seattle)GORASP2
PDB (SRS)3RLE    4EDJ   
PDB (PDBSum)3RLE    4EDJ   
PDB (IMB)3RLE    4EDJ   
PDB (RSDB)3RLE    4EDJ   
Structural Biology KnowledgeBase3RLE    4EDJ   
SCOP (Structural Classification of Proteins)3RLE    4EDJ   
CATH (Classification of proteins structures)3RLE    4EDJ   
SuperfamilyQ9H8Y8
Human Protein AtlasENSG00000115806
Peptide AtlasQ9H8Y8
HPRD08303
IPIIPI00941614   IPI00743931   IPI00917368   IPI00916299   IPI00916488   IPI00917113   
Protein Interaction databases
DIP (DOE-UCLA)Q9H8Y8
IntAct (EBI)Q9H8Y8
FunCoupENSG00000115806
BioGRIDGORASP2
STRING (EMBL)GORASP2
ZODIACGORASP2
Ontologies - Pathways
QuickGOQ9H8Y8
Ontology : AmiGOGolgi membrane  protein binding  Golgi apparatus  Golgi apparatus  organelle organization  Golgi organization  membrane  
Ontology : EGO-EBIGolgi membrane  protein binding  Golgi apparatus  Golgi apparatus  organelle organization  Golgi organization  membrane  
NDEx NetworkGORASP2
Atlas of Cancer Signalling NetworkGORASP2
Wikipedia pathwaysGORASP2
Orthology - Evolution
OrthoDB26003
GeneTree (enSembl)ENSG00000115806
Phylogenetic Trees/Animal Genes : TreeFamGORASP2
HOVERGENQ9H8Y8
HOGENOMQ9H8Y8
Homologs : HomoloGeneGORASP2
Homology/Alignments : Family Browser (UCSC)GORASP2
Gene fusions - Rearrangements
Fusion : MitelmanCOL1A1/GORASP2 [17q21.33/2q31.1]  [t(2;17)(q31;q21)]  
Fusion : MitelmanGORASP2/WIPF1 [2q31.1/2q31.1]  [t(2;2)(q31;q31)]  
Fusion: TCGAGORASP2 2q31.1 AC007405.7 LUAD
Fusion: TCGAGORASP2 2q31.1 WIPF1 2q31.1 KIRC
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGORASP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GORASP2
dbVarGORASP2
ClinVarGORASP2
1000_GenomesGORASP2 
Exome Variant ServerGORASP2
ExAC (Exome Aggregation Consortium)GORASP2 (select the gene name)
Genetic variants : HAPMAP26003
Genomic Variants (DGV)GORASP2 [DGVbeta]
DECIPHERGORASP2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGORASP2 
Mutations
ICGC Data PortalGORASP2 
TCGA Data PortalGORASP2 
Broad Tumor PortalGORASP2
OASIS PortalGORASP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGORASP2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGORASP2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GORASP2
DgiDB (Drug Gene Interaction Database)GORASP2
DoCM (Curated mutations)GORASP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GORASP2 (select a term)
intoGenGORASP2
Cancer3DGORASP2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608693   
Orphanet
MedgenGORASP2
Genetic Testing Registry GORASP2
NextProtQ9H8Y8 [Medical]
TSGene26003
GENETestsGORASP2
Target ValidationGORASP2
Huge Navigator GORASP2 [HugePedia]
snp3D : Map Gene to Disease26003
BioCentury BCIQGORASP2
ClinGenGORASP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26003
Chemical/Pharm GKB GenePA38457
Clinical trialGORASP2
Miscellaneous
canSAR (ICR)GORASP2 (select the gene name)
Probes
Litterature
PubMed42 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGORASP2
EVEXGORASP2
GoPubMedGORASP2
iHOPGORASP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:35:42 CEST 2017

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