GP1BA (glycoprotein Ib (platelet), alpha polypeptide)

Identity

Other names	BSS
	CD42B
	CD42b-alpha
	GP1B
	MGC34595
HGNC	GP1BA
Location	17pter-p12
Location_base_pair	Starts at 4776372 and ends at 4779067 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	GP1BA   4439
Entrez_Gene	GP1BA  2811  glycoprotein Ib (platelet), alpha polypeptide
	Cards
GeneCards	GP1BA
Ensembl	GP1BA [Search_View]   ENSG00000185245 [Gene_View]
Genatlas	GP1BA
GeneLynx	GP1BA
eGenome	GP1BA
euGene	2811
	Genomic and cartography
GoldenPath	GP1BA  -     chr17:4776372-4779067 +  17p13.2   [Description]    (hg18-March_2006)
Ensembl	GP1BA - 17p13.2 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	GP1BA
	Gene and transcription
Genbank	BC027955 [ ENTREZ ]
Genbank	BE463855 [ ENTREZ ]
Genbank	DQ890943 [ ENTREZ ]
Genbank	DQ894105 [ ENTREZ ]
Genbank	J02940 [ ENTREZ ]
RefSeq	NM_000173 [ SRS ]    NM_000173 [ ENTREZ ]
RefSeq	AC_000060 [ SRS ]    AC_000060 [ ENTREZ ]
RefSeq	AC_000149 [ SRS ]    AC_000149 [ ENTREZ ]
RefSeq	NC_000017 [ SRS ]    NC_000017 [ ENTREZ ]
RefSeq	NT_010718 [ SRS ]    NT_010718 [ ENTREZ ]
RefSeq	NW_001838403 [ SRS ]    NW_001838403 [ ENTREZ ]
RefSeq	NW_926584 [ SRS ]    NW_926584 [ ENTREZ ]
AceView	GP1BA AceView - NCBI
Unigene	Hs.1472 [ SRS ]    Hs.1472 [ NCBI ]     HS1472 [ spliceNest ]
Fast-db	1814 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P07359 [ SRS]    P07359 [ EXPASY ]     P07359 [ INTERPRO ]     P07359 [ UNIPROT ]
Interpro	IPR001611 LRR [ SRS ]    IPR001611 LRR [ EBI ]
Interpro	IPR000483 LRR_C [ SRS ]    IPR000483 LRR_C [ EBI ]
Interpro	IPR000372 LRR_cys_N [ SRS ]    IPR000372 LRR_cys_N [ EBI ]
Interpro	IPR003591 LRR_sub-typ [ SRS ]    IPR003591 LRR_sub-typ [ EBI ]
CluSTr	P07359
Pfam	PF00560 LRR_1 [ SRS ]    PF00560 LRR_1 [ Sanger ]    pfam00560 [ NCBI-CDD ]
Pfam	PF01462 LRRNT [ SRS ]    PF01462 LRRNT [ Sanger ]    pfam01462 [ NCBI-CDD ]
Smart	SM00369 LRR_TYP [EMBL]
Smart	SM00082 LRRCT [EMBL]
Smart	SM00013 LRRNT [EMBL]
Blocks	P07359
PDB	1GWB [ SRS ]    1GWB [ PdbSum ],   1GWB [ IMB ]   1GWB [ RSDB ]
PDB	1K13 [ SRS ]    1K13 [ PdbSum ],   1K13 [ IMB ]   1K13 [ RSDB ]
PDB	1M0Z [ SRS ]    1M0Z [ PdbSum ],   1M0Z [ IMB ]   1M0Z [ RSDB ]
PDB	1M10 [ SRS ]    1M10 [ PdbSum ],   1M10 [ IMB ]   1M10 [ RSDB ]
PDB	1OOK [ SRS ]    1OOK [ PdbSum ],   1OOK [ IMB ]   1OOK [ RSDB ]
PDB	1P8V [ SRS ]    1P8V [ PdbSum ],   1P8V [ IMB ]   1P8V [ RSDB ]
PDB	1P9A [ SRS ]    1P9A [ PdbSum ],   1P9A [ IMB ]   1P9A [ RSDB ]
PDB	1QYY [ SRS ]    1QYY [ PdbSum ],   1QYY [ IMB ]   1QYY [ RSDB ]
PDB	1SQ0 [ SRS ]    1SQ0 [ PdbSum ],   1SQ0 [ IMB ]   1SQ0 [ RSDB ]
PDB	1U0N [ SRS ]    1U0N [ PdbSum ],   1U0N [ IMB ]   1U0N [ RSDB ]
PDB	2BP3 [ SRS ]    2BP3 [ PdbSum ],   2BP3 [ IMB ]   2BP3 [ RSDB ]
HPRD	01976
	Protein Interaction databases
DIP	P07359
IntAct	P07359
	Polymorphism : SNP, mutations, diseases
OMIM	177820;231200;258660;606672    [ map ]
GENECLINICS	177820;231200;258660;606672
SNP	GP1BA [dbSNP-NCBI]
SNP	NM_000173 [SNP-NCI]
SNP	GP1BA [GeneSNPs - Utah]  GP1BA] [HGBASE - SRS]
HAPMAP	GP1BA [HAPMAP]
HGMD	GP1BA
	General knowledge
Family Browser	GP1BA [UCSC Family Browser]
SOURCE	NM_000173
SMD	Hs.1472
SAGE	Hs.1472
GO	cell morphogenesis [Amigo]  cell morphogenesis
GO	protein binding [Amigo]  protein binding
GO	membrane fraction [Amigo]  membrane fraction
GO	plasma membrane [Amigo]  plasma membrane
GO	plasma membrane [Amigo]  plasma membrane
GO	integral to plasma membrane [Amigo]  integral to plasma membrane
GO	cell adhesion [Amigo]  cell adhesion
GO	cell surface receptor linked signal transduction [Amigo]  cell surface receptor linked signal transduction
GO	thrombin receptor activity [Amigo]  thrombin receptor activity
GO	platelet activation [Amigo]  platelet activation
GO	regulation of blood coagulation [Amigo]  regulation of blood coagulation
GO	platelet alpha granule membrane [Amigo]  platelet alpha granule membrane
GO	fibrinolysis [Amigo]  fibrinolysis
KEGG	ECM-receptor interaction
KEGG	Hematopoietic cell lineage
PubGene	GP1BA
TreeFam	GP1BA
CTD	2811 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	GP1BA Related clones (RZPD - Berlin)
	PubMed
PubMed	172 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:15:03 2008