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GP2 (glycoprotein 2)

Identity

Alias_namesglycoprotein 2 (zymogen granule membrane)
Alias_symbol (synonym)ZAP75
Other alias
HGNC (Hugo) GP2
LocusID (NCBI) 2813
Atlas_Id 52181
Location 16p12.3  [Link to chromosome band 16p12]
Location_base_pair Starts at 20320896 and ends at 20338942 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GP2   4441
Cards
Entrez_Gene (NCBI)GP2  2813  glycoprotein 2
AliasesZAP75
GeneCards (Weizmann)GP2
Ensembl hg19 (Hinxton)ENSG00000169347 [Gene_View]  chr16:20320896-20338942 [Contig_View]  GP2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000169347 [Gene_View]  chr16:20320896-20338942 [Contig_View]  GP2 [Vega]
ICGC DataPortalENSG00000169347
TCGA cBioPortalGP2
AceView (NCBI)GP2
Genatlas (Paris)GP2
WikiGenes2813
SOURCE (Princeton)GP2
Genetics Home Reference (NIH)GP2
Genomic and cartography
GoldenPath hg19 (UCSC)GP2  -     chr16:20320896-20338942 -  16p12.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GP2  -     16p12.3   [Description]    (hg38-Dec_2013)
EnsemblGP2 - 16p12.3 [CytoView hg19]  GP2 - 16p12.3 [CytoView hg38]
Mapping of homologs : NCBIGP2 [Mapview hg19]  GP2 [Mapview hg38]
OMIM602977   
Gene and transcription
Genbank (Entrez)AB035541 AB035542 AK293384 AK312277 BC032693
RefSeq transcript (Entrez)NM_001007240 NM_001007241 NM_001007242 NM_001502
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_187260 NW_004929400
Consensus coding sequences : CCDS (NCBI)GP2
Cluster EST : UnigeneHs.53985 [ NCBI ]
CGAP (NCI)Hs.53985
Alternative Splicing GalleryENSG00000169347
Gene ExpressionGP2 [ NCBI-GEO ]   GP2 [ EBI - ARRAY_EXPRESS ]   GP2 [ SEEK ]   GP2 [ MEM ]
Gene Expression Viewer (FireBrowse)GP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2813
GTEX Portal (Tissue expression)GP2
Protein : pattern, domain, 3D structure
UniProt/SwissProtP55259   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP55259  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP55259
Splice isoforms : SwissVarP55259
PhosPhoSitePlusP55259
Domaine pattern : Prosite (Expaxy)ZP_1 (PS00682)    ZP_2 (PS51034)   
Domains : Interpro (EBI)ZP_dom    ZP_dom_CS   
Domain families : Pfam (Sanger)Zona_pellucida (PF00100)   
Domain families : Pfam (NCBI)pfam00100   
Domain families : Smart (EMBL)ZP (SM00241)  
Conserved Domain (NCBI)GP2
DMDM Disease mutations2813
Blocks (Seattle)GP2
SuperfamilyP55259
Human Protein AtlasENSG00000169347
Peptide AtlasP55259
HPRD04279
IPIIPI00470823   IPI01014468   IPI00914943   IPI00914914   IPI00299429   
Protein Interaction databases
DIP (DOE-UCLA)P55259
IntAct (EBI)P55259
FunCoupENSG00000169347
BioGRIDGP2
STRING (EMBL)GP2
ZODIACGP2
Ontologies - Pathways
QuickGOP55259
Ontology : AmiGOplasma membrane  anchored component of membrane  extracellular exosome  
Ontology : EGO-EBIplasma membrane  anchored component of membrane  extracellular exosome  
NDEx NetworkGP2
Atlas of Cancer Signalling NetworkGP2
Wikipedia pathwaysGP2
Orthology - Evolution
OrthoDB2813
GeneTree (enSembl)ENSG00000169347
Phylogenetic Trees/Animal Genes : TreeFamGP2
HOVERGENP55259
HOGENOMP55259
Homologs : HomoloGeneGP2
Homology/Alignments : Family Browser (UCSC)GP2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GP2
dbVarGP2
ClinVarGP2
1000_GenomesGP2 
Exome Variant ServerGP2
ExAC (Exome Aggregation Consortium)GP2 (select the gene name)
Genetic variants : HAPMAP2813
Genomic Variants (DGV)GP2 [DGVbeta]
DECIPHER (Syndromes)16:20320896-20338942  ENSG00000169347
CONAN: Copy Number AnalysisGP2 
Mutations
ICGC Data PortalGP2 
TCGA Data PortalGP2 
Broad Tumor PortalGP2
OASIS PortalGP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGP2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGP2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GP2
DgiDB (Drug Gene Interaction Database)GP2
DoCM (Curated mutations)GP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GP2 (select a term)
intoGenGP2
Cancer3DGP2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602977   
Orphanet
MedgenGP2
Genetic Testing Registry GP2
NextProtP55259 [Medical]
TSGene2813
GENETestsGP2
Huge Navigator GP2 [HugePedia]
snp3D : Map Gene to Disease2813
BioCentury BCIQGP2
ClinGenGP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2813
Chemical/Pharm GKB GenePA28822
Clinical trialGP2
Miscellaneous
canSAR (ICR)GP2 (select the gene name)
Probes
Litterature
PubMed29 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGP2
EVEXGP2
GoPubMedGP2
iHOPGP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 30 15:02:48 CEST 2017

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