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GPAT2P2 (glycerol-3-phosphate acyltransferase 2 pseudogene 2)

Identity

Other alias-
HGNC (Hugo) GPAT2P2
LocusID (NCBI) 653924
Atlas_Id 78673
Location 2q11.2  [Link to chromosome band 2q11]
Location_base_pair Starts at 97081602 and ends at 97082645 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)GPAT2P2   52331
Cards
Entrez_Gene (NCBI)GPAT2P2  653924  glycerol-3-phosphate acyltransferase 2 pseudogene 2
Aliases
GeneCards (Weizmann)GPAT2P2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:97081602-97082645 [Contig_View]  GPAT2P2 [Vega]
TCGA cBioPortalGPAT2P2
AceView (NCBI)GPAT2P2
Genatlas (Paris)GPAT2P2
WikiGenes653924
SOURCE (Princeton)GPAT2P2
Genetics Home Reference (NIH)GPAT2P2
Genomic and cartography
GoldenPath hg38 (UCSC)GPAT2P2  -     chr2:97081602-97082645 -  2q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPAT2P2  -     2q11.2   [Description]    (hg19-Feb_2009)
EnsemblGPAT2P2 - 2q11.2 [CytoView hg19]  GPAT2P2 - 2q11.2 [CytoView hg38]
Mapping of homologs : NCBIGPAT2P2 [Mapview hg19]  GPAT2P2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC104425
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPAT2P2
Cluster EST : UnigeneHs.737451 [ NCBI ]
CGAP (NCI)Hs.737451
Gene ExpressionGPAT2P2 [ NCBI-GEO ]   GPAT2P2 [ EBI - ARRAY_EXPRESS ]   GPAT2P2 [ SEEK ]   GPAT2P2 [ MEM ]
Gene Expression Viewer (FireBrowse)GPAT2P2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)653924
GTEX Portal (Tissue expression)GPAT2P2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GPAT2P2
DMDM Disease mutations653924
Blocks (Seattle)GPAT2P2
Protein Interaction databases
BioGRIDGPAT2P2
STRING (EMBL)GPAT2P2
ZODIACGPAT2P2
Ontologies - Pathways
Huge Navigator GPAT2P2 [HugePedia]
snp3D : Map Gene to Disease653924
BioCentury BCIQGPAT2P2
ClinGenGPAT2P2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD653924
Clinical trialGPAT2P2
Miscellaneous
canSAR (ICR)GPAT2P2 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPAT2P2
EVEXGPAT2P2
GoPubMedGPAT2P2
iHOPGPAT2P2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:49:25 CET 2017

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