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GPAT4 (glycerol-3-phosphate acyltransferase 4)

Identity

Alias_namesAGPAT6
1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)
1-acylglycerol-3-phosphate O-acyltransferase 6
Alias_symbol (synonym)DKFZp586M1819
LPAAT-zeta
TSARG7
Other alias1-AGPAT 6
LPAATZ
HGNC (Hugo) GPAT4
LocusID (NCBI) 137964
Atlas_Id 77796
Location 8p11.21  [Link to chromosome band 8p11]
Location_base_pair Starts at 41435707 and ends at 41482520 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CDK2AP2 (11q13.2) / GPAT4 (8p11.21)GPAT4 (8p11.21) / ADAM9 (8p11.22)HGSNAT (8p11.21) / GPAT4 (8p11.21)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)GPAT4   20880
Cards
Entrez_Gene (NCBI)GPAT4  137964  glycerol-3-phosphate acyltransferase 4
Aliases1-AGPAT; AGPAT6; LPAAT-zeta; LPAATZ; 
TSARG7
GeneCards (Weizmann)GPAT4
Ensembl hg19 (Hinxton)ENSG00000158669 [Gene_View]  chr8:41435707-41482520 [Contig_View]  GPAT4 [Vega]
Ensembl hg38 (Hinxton)ENSG00000158669 [Gene_View]  chr8:41435707-41482520 [Contig_View]  GPAT4 [Vega]
ICGC DataPortalENSG00000158669
TCGA cBioPortalGPAT4
AceView (NCBI)GPAT4
Genatlas (Paris)GPAT4
WikiGenes137964
SOURCE (Princeton)GPAT4
Genetics Home Reference (NIH)GPAT4
Genomic and cartography
GoldenPath hg19 (UCSC)GPAT4  -     chr8:41435707-41482520 +  8p11.21   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GPAT4  -     8p11.21   [Description]    (hg38-Dec_2013)
EnsemblGPAT4 - 8p11.21 [CytoView hg19]  GPAT4 - 8p11.21 [CytoView hg38]
Mapping of homologs : NCBIGPAT4 [Mapview hg19]  GPAT4 [Mapview hg38]
OMIM608143   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_178819
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_167187 NW_004929337
Consensus coding sequences : CCDS (NCBI)GPAT4
Cluster EST : UnigeneHs.355753 [ NCBI ]
CGAP (NCI)Hs.355753
Alternative Splicing GalleryENSG00000158669
Gene ExpressionGPAT4 [ NCBI-GEO ]   GPAT4 [ EBI - ARRAY_EXPRESS ]   GPAT4 [ SEEK ]   GPAT4 [ MEM ]
Gene Expression Viewer (FireBrowse)GPAT4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)137964
GTEX Portal (Tissue expression)GPAT4
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GPAT4
DMDM Disease mutations137964
Blocks (Seattle)GPAT4
Human Protein AtlasENSG00000158669
HPRD12175
IPIIPI00016070   IPI00978987   IPI00982342   IPI00982997   
Protein Interaction databases
FunCoupENSG00000158669
BioGRIDGPAT4
STRING (EMBL)GPAT4
ZODIACGPAT4
Ontologies - Pathways
Huge Navigator GPAT4 [HugePedia]
snp3D : Map Gene to Disease137964
BioCentury BCIQGPAT4
ClinGenGPAT4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD137964
Chemical/Pharm GKB GenePA142672637
Clinical trialGPAT4
Miscellaneous
canSAR (ICR)GPAT4 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPAT4
EVEXGPAT4
GoPubMedGPAT4
iHOPGPAT4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:06:33 CET 2017

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