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GPR1 (G protein-coupled receptor 1)

Identity

Other alias-
HGNC (Hugo) GPR1
LocusID (NCBI) 2825
Atlas_Id 63942
Location 2q33.3  [Link to chromosome band 2q33]
Location_base_pair Starts at 206175316 and ends at 206218047 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPR1   4463
Cards
Entrez_Gene (NCBI)GPR1  2825  G protein-coupled receptor 1
Aliases
GeneCards (Weizmann)GPR1
Ensembl hg19 (Hinxton)ENSG00000183671 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183671 [Gene_View]  chr2:206175316-206218047 [Contig_View]  GPR1 [Vega]
ICGC DataPortalENSG00000183671
TCGA cBioPortalGPR1
AceView (NCBI)GPR1
Genatlas (Paris)GPR1
WikiGenes2825
SOURCE (Princeton)GPR1
Genetics Home Reference (NIH)GPR1
Genomic and cartography
GoldenPath hg38 (UCSC)GPR1  -     chr2:206175316-206218047 -  2q33.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPR1  -     2q33.3   [Description]    (hg19-Feb_2009)
EnsemblGPR1 - 2q33.3 [CytoView hg19]  GPR1 - 2q33.3 [CytoView hg38]
Mapping of homologs : NCBIGPR1 [Mapview hg19]  GPR1 [Mapview hg38]
OMIM600239   
Gene and transcription
Genbank (Entrez)AK075130 AK290976 AK312917 AL550780 BC058005
RefSeq transcript (Entrez)NM_001098199 NM_001261452 NM_001261453 NM_001261454 NM_001261455 NM_005279
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPR1
Cluster EST : UnigeneHs.184907 [ NCBI ]
CGAP (NCI)Hs.184907
Alternative Splicing GalleryENSG00000183671
Gene ExpressionGPR1 [ NCBI-GEO ]   GPR1 [ EBI - ARRAY_EXPRESS ]   GPR1 [ SEEK ]   GPR1 [ MEM ]
Gene Expression Viewer (FireBrowse)GPR1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2825
GTEX Portal (Tissue expression)GPR1
Protein : pattern, domain, 3D structure
UniProt/SwissProtP46091   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP46091  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP46091
Splice isoforms : SwissVarP46091
PhosPhoSitePlusP46091
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    GPR1_orph_rcpt   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)GPR1
DMDM Disease mutations2825
Blocks (Seattle)GPR1
SuperfamilyP46091
Human Protein AtlasENSG00000183671
Peptide AtlasP46091
HPRD02585
IPIIPI00004345   IPI00925238   IPI00924604   IPI00925602   IPI00926707   IPI00925972   IPI00925307   
Protein Interaction databases
DIP (DOE-UCLA)P46091
IntAct (EBI)P46091
FunCoupENSG00000183671
BioGRIDGPR1
STRING (EMBL)GPR1
ZODIACGPR1
Ontologies - Pathways
QuickGOP46091
Ontology : AmiGOG-protein coupled receptor activity  protein binding  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger  neuropeptide signaling pathway  chemical synaptic transmission  neuropeptide binding  neuron projection  intracellular membrane-bounded organelle  
Ontology : EGO-EBIG-protein coupled receptor activity  protein binding  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger  neuropeptide signaling pathway  chemical synaptic transmission  neuropeptide binding  neuron projection  intracellular membrane-bounded organelle  
NDEx NetworkGPR1
Atlas of Cancer Signalling NetworkGPR1
Wikipedia pathwaysGPR1
Orthology - Evolution
OrthoDB2825
GeneTree (enSembl)ENSG00000183671
Phylogenetic Trees/Animal Genes : TreeFamGPR1
HOVERGENP46091
HOGENOMP46091
Homologs : HomoloGeneGPR1
Homology/Alignments : Family Browser (UCSC)GPR1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPR1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPR1
dbVarGPR1
ClinVarGPR1
1000_GenomesGPR1 
Exome Variant ServerGPR1
ExAC (Exome Aggregation Consortium)GPR1 (select the gene name)
Genetic variants : HAPMAP2825
Genomic Variants (DGV)GPR1 [DGVbeta]
DECIPHERGPR1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGPR1 
Mutations
ICGC Data PortalGPR1 
TCGA Data PortalGPR1 
Broad Tumor PortalGPR1
OASIS PortalGPR1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPR1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPR1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPR1
DgiDB (Drug Gene Interaction Database)GPR1
DoCM (Curated mutations)GPR1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPR1 (select a term)
intoGenGPR1
Cancer3DGPR1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM600239   
Orphanet
MedgenGPR1
Genetic Testing Registry GPR1
NextProtP46091 [Medical]
TSGene2825
GENETestsGPR1
Target ValidationGPR1
Huge Navigator GPR1 [HugePedia]
snp3D : Map Gene to Disease2825
BioCentury BCIQGPR1
ClinGenGPR1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2825
Chemical/Pharm GKB GenePA28846
Clinical trialGPR1
Miscellaneous
canSAR (ICR)GPR1 (select the gene name)
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR1
EVEXGPR1
GoPubMedGPR1
iHOPGPR1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:09:42 CEST 2017

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