Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

GPR137B (G protein-coupled receptor 137B)

Identity

Alias_namesTM7SF1
transmembrane 7 superfamily member 1 (upregulated in kidney)
Other alias
HGNC (Hugo) GPR137B
LocusID (NCBI) 7107
Atlas_Id 63957
Location 1q42.3  [Link to chromosome band 1q42]
Location_base_pair Starts at 236142532 and ends at 236208909 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GPR137B (1q42.3) / MFHAS1 (8p23.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPR137B   11862
Cards
Entrez_Gene (NCBI)GPR137B  7107  G protein-coupled receptor 137B
AliasesTM7SF1
GeneCards (Weizmann)GPR137B
Ensembl hg19 (Hinxton)ENSG00000077585 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000077585 [Gene_View]  chr1:236142532-236208909 [Contig_View]  GPR137B [Vega]
ICGC DataPortalENSG00000077585
TCGA cBioPortalGPR137B
AceView (NCBI)GPR137B
Genatlas (Paris)GPR137B
WikiGenes7107
SOURCE (Princeton)GPR137B
Genetics Home Reference (NIH)GPR137B
Genomic and cartography
GoldenPath hg38 (UCSC)GPR137B  -     chr1:236142532-236208909 +  1q42.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPR137B  -     1q42.3   [Description]    (hg19-Feb_2009)
EnsemblGPR137B - 1q42.3 [CytoView hg19]  GPR137B - 1q42.3 [CytoView hg38]
Mapping of homologs : NCBIGPR137B [Mapview hg19]  GPR137B [Mapview hg38]
OMIM604658   
Gene and transcription
Genbank (Entrez)AF027826 AI634648 AK223632 AK295408 AK301552
RefSeq transcript (Entrez)NM_003272
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPR137B
Cluster EST : UnigeneHs.498160 [ NCBI ]
CGAP (NCI)Hs.498160
Alternative Splicing GalleryENSG00000077585
Gene ExpressionGPR137B [ NCBI-GEO ]   GPR137B [ EBI - ARRAY_EXPRESS ]   GPR137B [ SEEK ]   GPR137B [ MEM ]
Gene Expression Viewer (FireBrowse)GPR137B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7107
GTEX Portal (Tissue expression)GPR137B
Protein : pattern, domain, 3D structure
UniProt/SwissProtO60478   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO60478  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO60478
Splice isoforms : SwissVarO60478
PhosPhoSitePlusO60478
Domains : Interpro (EBI)GPR137   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GPR137B
DMDM Disease mutations7107
Blocks (Seattle)GPR137B
SuperfamilyO60478
Human Protein AtlasENSG00000077585
Peptide AtlasO60478
HPRD06878
IPIIPI00019017   IPI00647913   IPI00640297   IPI00514591   
Protein Interaction databases
DIP (DOE-UCLA)O60478
IntAct (EBI)O60478
FunCoupENSG00000077585
BioGRIDGPR137B
STRING (EMBL)GPR137B
ZODIACGPR137B
Ontologies - Pathways
QuickGOO60478
Ontology : AmiGOlysosome  lysosomal membrane  integral component of plasma membrane  membrane  
Ontology : EGO-EBIlysosome  lysosomal membrane  integral component of plasma membrane  membrane  
NDEx NetworkGPR137B
Atlas of Cancer Signalling NetworkGPR137B
Wikipedia pathwaysGPR137B
Orthology - Evolution
OrthoDB7107
GeneTree (enSembl)ENSG00000077585
Phylogenetic Trees/Animal Genes : TreeFamGPR137B
HOVERGENO60478
HOGENOMO60478
Homologs : HomoloGeneGPR137B
Homology/Alignments : Family Browser (UCSC)GPR137B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPR137B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPR137B
dbVarGPR137B
ClinVarGPR137B
1000_GenomesGPR137B 
Exome Variant ServerGPR137B
ExAC (Exome Aggregation Consortium)GPR137B (select the gene name)
Genetic variants : HAPMAP7107
Genomic Variants (DGV)GPR137B [DGVbeta]
DECIPHERGPR137B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGPR137B 
Mutations
ICGC Data PortalGPR137B 
TCGA Data PortalGPR137B 
Broad Tumor PortalGPR137B
OASIS PortalGPR137B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPR137B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPR137B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPR137B
DgiDB (Drug Gene Interaction Database)GPR137B
DoCM (Curated mutations)GPR137B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPR137B (select a term)
intoGenGPR137B
Cancer3DGPR137B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604658   
Orphanet
MedgenGPR137B
Genetic Testing Registry GPR137B
NextProtO60478 [Medical]
TSGene7107
GENETestsGPR137B
Target ValidationGPR137B
Huge Navigator GPR137B [HugePedia]
snp3D : Map Gene to Disease7107
BioCentury BCIQGPR137B
ClinGenGPR137B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7107
Chemical/Pharm GKB GenePA36563
Clinical trialGPR137B
Miscellaneous
canSAR (ICR)GPR137B (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR137B
EVEXGPR137B
GoPubMedGPR137B
iHOPGPR137B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 1 16:16:30 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.