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GPR141 (G protein-coupled receptor 141)

Identity

Alias_symbol (synonym)PGR13
Other alias
HGNC (Hugo) GPR141
LocusID (NCBI) 353345
Atlas_Id 63960
Location 7p14.1  [Link to chromosome band 7p14]
Location_base_pair Starts at 37683775 and ends at 37743821 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
GPR141 (7p14.1) / ONECUT1 (15q21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPR141   19997
Cards
Entrez_Gene (NCBI)GPR141  353345  G protein-coupled receptor 141
AliasesPGR13
GeneCards (Weizmann)GPR141
Ensembl hg19 (Hinxton)ENSG00000187037 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000187037 [Gene_View]  chr7:37683775-37743821 [Contig_View]  GPR141 [Vega]
ICGC DataPortalENSG00000187037
TCGA cBioPortalGPR141
AceView (NCBI)GPR141
Genatlas (Paris)GPR141
WikiGenes353345
SOURCE (Princeton)GPR141
Genetics Home Reference (NIH)GPR141
Genomic and cartography
GoldenPath hg38 (UCSC)GPR141  -     chr7:37683775-37743821 +  7p14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPR141  -     7p14.1   [Description]    (hg19-Feb_2009)
EnsemblGPR141 - 7p14.1 [CytoView hg19]  GPR141 - 7p14.1 [CytoView hg38]
Mapping of homologs : NCBIGPR141 [Mapview hg19]  GPR141 [Mapview hg38]
OMIM609045   
Gene and transcription
Genbank (Entrez)AY255538 AY288420 BC043356 BC120951 BC120952
RefSeq transcript (Entrez)NM_001329993 NM_001329994 NM_181791
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPR141
Cluster EST : UnigeneHs.688230 [ NCBI ]
CGAP (NCI)Hs.688230
Alternative Splicing GalleryENSG00000187037
Gene ExpressionGPR141 [ NCBI-GEO ]   GPR141 [ EBI - ARRAY_EXPRESS ]   GPR141 [ SEEK ]   GPR141 [ MEM ]
Gene Expression Viewer (FireBrowse)GPR141 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)353345
GTEX Portal (Tissue expression)GPR141
Human Protein AtlasENSG00000187037-GPR141 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z602   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z602  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z602
Splice isoforms : SwissVarQ7Z602
PhosPhoSitePlusQ7Z602
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)GPR141
DMDM Disease mutations353345
Blocks (Seattle)GPR141
SuperfamilyQ7Z602
Human Protein Atlas [tissue]ENSG00000187037-GPR141 [tissue]
Peptide AtlasQ7Z602
HPRD16423
IPIIPI00328432   IPI00927758   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z602
IntAct (EBI)Q7Z602
FunCoupENSG00000187037
BioGRIDGPR141
STRING (EMBL)GPR141
ZODIACGPR141
Ontologies - Pathways
QuickGOQ7Z602
Ontology : AmiGOG-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  
Ontology : EGO-EBIG-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  
NDEx NetworkGPR141
Atlas of Cancer Signalling NetworkGPR141
Wikipedia pathwaysGPR141
Orthology - Evolution
OrthoDB353345
GeneTree (enSembl)ENSG00000187037
Phylogenetic Trees/Animal Genes : TreeFamGPR141
HOVERGENQ7Z602
HOGENOMQ7Z602
Homologs : HomoloGeneGPR141
Homology/Alignments : Family Browser (UCSC)GPR141
Gene fusions - Rearrangements
Tumor Fusion PortalGPR141
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPR141 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPR141
dbVarGPR141
ClinVarGPR141
1000_GenomesGPR141 
Exome Variant ServerGPR141
ExAC (Exome Aggregation Consortium)ENSG00000187037
GNOMAD BrowserENSG00000187037
Genetic variants : HAPMAP353345
Genomic Variants (DGV)GPR141 [DGVbeta]
DECIPHERGPR141 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGPR141 
Mutations
ICGC Data PortalGPR141 
TCGA Data PortalGPR141 
Broad Tumor PortalGPR141
OASIS PortalGPR141 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPR141  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPR141
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPR141
DgiDB (Drug Gene Interaction Database)GPR141
DoCM (Curated mutations)GPR141 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPR141 (select a term)
intoGenGPR141
Cancer3DGPR141(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609045   
Orphanet
DisGeNETGPR141
MedgenGPR141
Genetic Testing Registry GPR141
NextProtQ7Z602 [Medical]
TSGene353345
GENETestsGPR141
Target ValidationGPR141
Huge Navigator GPR141 [HugePedia]
snp3D : Map Gene to Disease353345
BioCentury BCIQGPR141
ClinGenGPR141
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD353345
Chemical/Pharm GKB GenePA134923895
Clinical trialGPR141
Miscellaneous
canSAR (ICR)GPR141 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR141
EVEXGPR141
GoPubMedGPR141
iHOPGPR141
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:16:10 CET 2017

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