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GPR143 (G protein-coupled receptor 143)

Identity

Other namesNYS6
OA1
HGNC (Hugo) GPR143
LocusID (NCBI) 4935
Location Xp22.2
Location_base_pair Starts at 9693453 and ends at 9734005 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)GPR143   20145
Cards
Entrez_Gene (NCBI)GPR143  4935  G protein-coupled receptor 143
GeneCards (Weizmann)GPR143
Ensembl (Hinxton)ENSG00000101850 [Gene_View]  chrX:9693453-9734005 [Contig_View]  GPR143 [Vega]
AceView (NCBI)GPR143
Genatlas (Paris)GPR143
WikiGenes4935
SOURCE (Princeton)NM_000273
Genomic and cartography
GoldenPath (UCSC)GPR143  -  Xp22.2   chrX:9693453-9734005 -  Xp22.2   [Description]    (hg19-Feb_2009)
EnsemblGPR143 - Xp22.2 [CytoView]
Mapping of homologs : NCBIGPR143 [Mapview]
OMIM300500   300808   300814   
Gene and transcription
Genbank (Entrez)BC015657 BC068977 BU188283 Z48804
RefSeq transcript (Entrez)NM_000273
RefSeq genomic (Entrez)AC_000155 NC_000023 NC_018934 NG_009074 NT_167197 NW_001842360 NW_004929438
Consensus coding sequences : CCDS (NCBI)GPR143
Cluster EST : UnigeneHs.74124 [ NCBI ]
CGAP (NCI)Hs.74124
Alternative Splicing : Fast-db (Paris)GSHG0031966
Alternative Splicing GalleryENSG00000101850
Gene ExpressionGPR143 [ NCBI-GEO ]     GPR143 [ SEEK ]   GPR143 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP51810 (Uniprot)
NextProtP51810  [Medical]
With graphics : InterProP51810
Splice isoforms : SwissVarP51810 (Swissvar)
Domains : Interpro (EBI)Ocular_alb1   
Related proteins : CluSTrP51810
Domain families : Pfam (Sanger)Ocular_alb (PF02101)   
Domain families : Pfam (NCBI)pfam02101   
DMDM Disease mutations4935
Blocks (Seattle)P51810
Human Protein AtlasENSG00000101850
Peptide AtlasP51810
HPRD02355
IPIIPI00218565   IPI00646724   IPI00643895   
Protein Interaction databases
DIP (DOE-UCLA)P51810
IntAct (EBI)P51810
FunCoupENSG00000101850
BioGRIDGPR143
InParanoidP51810
Interologous Interaction database P51810
IntegromeDBGPR143
STRING (EMBL)GPR143
Ontologies - Pathways
Ontology : AmiGOG-protein coupled receptor activity  protein binding  cytoplasm  lysosomal membrane  Golgi apparatus  plasma membrane  eye pigment biosynthetic process  signal transduction  G-protein coupled receptor signaling pathway  G-protein coupled receptor signaling pathway  visual perception  membrane  integral to membrane  apical plasma membrane  melanosome localization  melanosome localization  melanosome transport  melanosome organization  melanosome membrane  dopamine binding  calcium-mediated signaling using intracellular calcium source  L-DOPA receptor activity  melanosome  phosphatidylinositol-mediated signaling  regulation of calcium-mediated signaling  L-DOPA binding  tyrosine binding  
Ontology : EGO-EBIG-protein coupled receptor activity  protein binding  cytoplasm  lysosomal membrane  Golgi apparatus  plasma membrane  eye pigment biosynthetic process  signal transduction  G-protein coupled receptor signaling pathway  G-protein coupled receptor signaling pathway  visual perception  membrane  integral to membrane  apical plasma membrane  melanosome localization  melanosome localization  melanosome transport  melanosome organization  melanosome membrane  dopamine binding  calcium-mediated signaling using intracellular calcium source  L-DOPA receptor activity  melanosome  phosphatidylinositol-mediated signaling  regulation of calcium-mediated signaling  L-DOPA binding  tyrosine binding  
REACTOMEGPR143
Protein Interaction DatabaseGPR143
Wikipedia pathwaysGPR143
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)GPR143
SNP (GeneSNP Utah)GPR143
SNP : HGBaseGPR143
Genetic variants : HAPMAPGPR143
1000_GenomesGPR143 
ICGC programENSG00000101850 
Somatic Mutations in Cancer : COSMICGPR143 
CONAN: Copy Number AnalysisGPR143 
Mutations and Diseases : HGMDGPR143
OMIM300500    300808    300814   
GENETestsGPR143
Disease Genetic AssociationGPR143
Huge Navigator GPR143 [HugePedia]  GPR143 [HugeCancerGEM]
Genomic VariantsGPR143  GPR143 [DGVbeta]
Exome VariantGPR143
dbVarGPR143
ClinVarGPR143
snp3D : Map Gene to Disease4935
General knowledge
Homologs : HomoloGeneGPR143
Homology/Alignments : Family Browser (UCSC)GPR143
Phylogenetic Trees/Animal Genes : TreeFamGPR143
Chemical/Protein Interactions : CTD4935
Chemical/Pharm GKB GenePA31872
Clinical trialGPR143
Cancer Resource (Charite)ENSG00000101850
Other databases
Probes
Litterature
PubMed43 Pubmed reference(s) in Entrez
CoreMineGPR143
iHOPGPR143
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Mar 31 09:16:46 CEST 2014

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