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GPR148 (G protein-coupled receptor 148)

Identity

Alias_symbol (synonym)PGR6
Other aliasBTR
HGNC (Hugo) GPR148
LocusID (NCBI) 344561
Atlas_Id 63964
Location 2q21.1  [Link to chromosome band 2q21]
Location_base_pair Starts at 131486643 and ends at 131487909 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPR148   23623
Cards
Entrez_Gene (NCBI)GPR148  344561  G protein-coupled receptor 148
AliasesBTR; PGR6
GeneCards (Weizmann)GPR148
Ensembl hg19 (Hinxton)ENSG00000173302 [Gene_View]  chr2:131486643-131487909 [Contig_View]  GPR148 [Vega]
Ensembl hg38 (Hinxton)ENSG00000173302 [Gene_View]  chr2:131486643-131487909 [Contig_View]  GPR148 [Vega]
ICGC DataPortalENSG00000173302
TCGA cBioPortalGPR148
AceView (NCBI)GPR148
Genatlas (Paris)GPR148
WikiGenes344561
SOURCE (Princeton)GPR148
Genetics Home Reference (NIH)GPR148
Genomic and cartography
GoldenPath hg19 (UCSC)GPR148  -     chr2:131486643-131487909 +  2q21.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GPR148  -     2q21.1   [Description]    (hg38-Dec_2013)
EnsemblGPR148 - 2q21.1 [CytoView hg19]  GPR148 - 2q21.1 [CytoView hg38]
Mapping of homologs : NCBIGPR148 [Mapview hg19]  GPR148 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY255532 AY280965 AY569570 BC105013 BC105041
RefSeq transcript (Entrez)NM_207364
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_005403 NW_004929304
Consensus coding sequences : CCDS (NCBI)GPR148
Cluster EST : UnigeneHs.452574 [ NCBI ]
CGAP (NCI)Hs.452574
Alternative Splicing GalleryENSG00000173302
Gene ExpressionGPR148 [ NCBI-GEO ]   GPR148 [ EBI - ARRAY_EXPRESS ]   GPR148 [ SEEK ]   GPR148 [ MEM ]
Gene Expression Viewer (FireBrowse)GPR148 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)344561
GTEX Portal (Tissue expression)GPR148
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TDV2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TDV2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TDV2
Splice isoforms : SwissVarQ8TDV2
PhosPhoSitePlusQ8TDV2
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)GPR148
DMDM Disease mutations344561
Blocks (Seattle)GPR148
SuperfamilyQ8TDV2
Human Protein AtlasENSG00000173302
Peptide AtlasQ8TDV2
HPRD13598
IPIIPI00260367   
Protein Interaction databases
DIP (DOE-UCLA)Q8TDV2
IntAct (EBI)Q8TDV2
FunCoupENSG00000173302
BioGRIDGPR148
STRING (EMBL)GPR148
ZODIACGPR148
Ontologies - Pathways
QuickGOQ8TDV2
Ontology : AmiGOG-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  
Ontology : EGO-EBIG-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  
NDEx NetworkGPR148
Atlas of Cancer Signalling NetworkGPR148
Wikipedia pathwaysGPR148
Orthology - Evolution
OrthoDB344561
GeneTree (enSembl)ENSG00000173302
Phylogenetic Trees/Animal Genes : TreeFamGPR148
HOVERGENQ8TDV2
HOGENOMQ8TDV2
Homologs : HomoloGeneGPR148
Homology/Alignments : Family Browser (UCSC)GPR148
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPR148 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPR148
dbVarGPR148
ClinVarGPR148
1000_GenomesGPR148 
Exome Variant ServerGPR148
ExAC (Exome Aggregation Consortium)GPR148 (select the gene name)
Genetic variants : HAPMAP344561
Genomic Variants (DGV)GPR148 [DGVbeta]
DECIPHER (Syndromes)2:131486643-131487909  ENSG00000173302
CONAN: Copy Number AnalysisGPR148 
Mutations
ICGC Data PortalGPR148 
TCGA Data PortalGPR148 
Broad Tumor PortalGPR148
OASIS PortalGPR148 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPR148  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPR148
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPR148
DgiDB (Drug Gene Interaction Database)GPR148
DoCM (Curated mutations)GPR148 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPR148 (select a term)
intoGenGPR148
Cancer3DGPR148(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGPR148
Genetic Testing Registry GPR148
NextProtQ8TDV2 [Medical]
TSGene344561
GENETestsGPR148
Huge Navigator GPR148 [HugePedia]
snp3D : Map Gene to Disease344561
BioCentury BCIQGPR148
ClinGenGPR148
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD344561
Chemical/Pharm GKB GenePA134942667
Clinical trialGPR148
Miscellaneous
canSAR (ICR)GPR148 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR148
EVEXGPR148
GoPubMedGPR148
iHOPGPR148
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:06:39 CET 2017

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