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GPR15 (G protein-coupled receptor 15)

Identity

Other aliasBOB
HGNC (Hugo) GPR15
LocusID (NCBI) 2838
Atlas_Id 63966
Location 3q11.2  [Link to chromosome band 3q11]
Location_base_pair Starts at 98531899 and ends at 98534679 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPR15   4469
Cards
Entrez_Gene (NCBI)GPR15  2838  G protein-coupled receptor 15
AliasesBOB
GeneCards (Weizmann)GPR15
Ensembl hg19 (Hinxton)ENSG00000154165 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000154165 [Gene_View]  chr3:98531899-98534679 [Contig_View]  GPR15 [Vega]
ICGC DataPortalENSG00000154165
TCGA cBioPortalGPR15
AceView (NCBI)GPR15
Genatlas (Paris)GPR15
WikiGenes2838
SOURCE (Princeton)GPR15
Genetics Home Reference (NIH)GPR15
Genomic and cartography
GoldenPath hg38 (UCSC)GPR15  -     chr3:98531899-98534679 +  3q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPR15  -     3q11.2   [Description]    (hg19-Feb_2009)
EnsemblGPR15 - 3q11.2 [CytoView hg19]  GPR15 - 3q11.2 [CytoView hg38]
Mapping of homologs : NCBIGPR15 [Mapview hg19]  GPR15 [Mapview hg38]
OMIM601166   
Gene and transcription
Genbank (Entrez)AA687817 AK313375 BC069437 BC101779 BC101781
RefSeq transcript (Entrez)NM_005290
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPR15
Cluster EST : UnigeneHs.563128 [ NCBI ]
CGAP (NCI)Hs.563128
Alternative Splicing GalleryENSG00000154165
Gene ExpressionGPR15 [ NCBI-GEO ]   GPR15 [ EBI - ARRAY_EXPRESS ]   GPR15 [ SEEK ]   GPR15 [ MEM ]
Gene Expression Viewer (FireBrowse)GPR15 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2838
GTEX Portal (Tissue expression)GPR15
Protein : pattern, domain, 3D structure
UniProt/SwissProtP49685   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP49685  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP49685
Splice isoforms : SwissVarP49685
PhosPhoSitePlusP49685
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Domain families : Smart (EMBL)7TM_GPCR_Srsx (SM01381)  
Conserved Domain (NCBI)GPR15
DMDM Disease mutations2838
Blocks (Seattle)GPR15
SuperfamilyP49685
Human Protein AtlasENSG00000154165
Peptide AtlasP49685
HPRD03102
IPIIPI00027756   
Protein Interaction databases
DIP (DOE-UCLA)P49685
IntAct (EBI)P49685
FunCoupENSG00000154165
BioGRIDGPR15
STRING (EMBL)GPR15
ZODIACGPR15
Ontologies - Pathways
QuickGOP49685
Ontology : AmiGOG-protein coupled receptor activity  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  T cell migration  
Ontology : EGO-EBIG-protein coupled receptor activity  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  T cell migration  
NDEx NetworkGPR15
Atlas of Cancer Signalling NetworkGPR15
Wikipedia pathwaysGPR15
Orthology - Evolution
OrthoDB2838
GeneTree (enSembl)ENSG00000154165
Phylogenetic Trees/Animal Genes : TreeFamGPR15
HOVERGENP49685
HOGENOMP49685
Homologs : HomoloGeneGPR15
Homology/Alignments : Family Browser (UCSC)GPR15
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPR15 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPR15
dbVarGPR15
ClinVarGPR15
1000_GenomesGPR15 
Exome Variant ServerGPR15
ExAC (Exome Aggregation Consortium)GPR15 (select the gene name)
Genetic variants : HAPMAP2838
Genomic Variants (DGV)GPR15 [DGVbeta]
DECIPHERGPR15 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGPR15 
Mutations
ICGC Data PortalGPR15 
TCGA Data PortalGPR15 
Broad Tumor PortalGPR15
OASIS PortalGPR15 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPR15  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPR15
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPR15
DgiDB (Drug Gene Interaction Database)GPR15
DoCM (Curated mutations)GPR15 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPR15 (select a term)
intoGenGPR15
Cancer3DGPR15(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601166   
Orphanet
MedgenGPR15
Genetic Testing Registry GPR15
NextProtP49685 [Medical]
TSGene2838
GENETestsGPR15
Target ValidationGPR15
Huge Navigator GPR15 [HugePedia]
snp3D : Map Gene to Disease2838
BioCentury BCIQGPR15
ClinGenGPR15
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2838
Chemical/Pharm GKB GenePA28858
Clinical trialGPR15
Miscellaneous
canSAR (ICR)GPR15 (select the gene name)
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR15
EVEXGPR15
GoPubMedGPR15
iHOPGPR15
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:09:44 CEST 2017

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