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GPR153 (G protein-coupled receptor 153)

Identity

Alias_symbol (synonym)PGR1
Other alias
HGNC (Hugo) GPR153
LocusID (NCBI) 387509
Atlas_Id 63970
Location 1p36.31  [Link to chromosome band 1p36]
Location_base_pair Starts at 6247346 and ends at 6260975 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ICMT (1p36.31) / GPR153 (1p36.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPR153   23618
Cards
Entrez_Gene (NCBI)GPR153  387509  G protein-coupled receptor 153
AliasesPGR1
GeneCards (Weizmann)GPR153
Ensembl hg19 (Hinxton)ENSG00000158292 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000158292 [Gene_View]  chr1:6247346-6260975 [Contig_View]  GPR153 [Vega]
ICGC DataPortalENSG00000158292
TCGA cBioPortalGPR153
AceView (NCBI)GPR153
Genatlas (Paris)GPR153
WikiGenes387509
SOURCE (Princeton)GPR153
Genetics Home Reference (NIH)GPR153
Genomic and cartography
GoldenPath hg38 (UCSC)GPR153  -     chr1:6247346-6260975 -  1p36.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPR153  -     1p36.31   [Description]    (hg19-Feb_2009)
EnsemblGPR153 - 1p36.31 [CytoView hg19]  GPR153 - 1p36.31 [CytoView hg38]
Mapping of homologs : NCBIGPR153 [Mapview hg19]  GPR153 [Mapview hg38]
OMIM614269   
Gene and transcription
Genbank (Entrez)AY255529 BC068275 BK005426 BQ575651 CR627473
RefSeq transcript (Entrez)NM_207370
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPR153
Cluster EST : UnigeneHs.531581 [ NCBI ]
CGAP (NCI)Hs.531581
Alternative Splicing GalleryENSG00000158292
Gene ExpressionGPR153 [ NCBI-GEO ]   GPR153 [ EBI - ARRAY_EXPRESS ]   GPR153 [ SEEK ]   GPR153 [ MEM ]
Gene Expression Viewer (FireBrowse)GPR153 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)387509
GTEX Portal (Tissue expression)GPR153
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6NV75   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6NV75  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6NV75
Splice isoforms : SwissVarQ6NV75
PhosPhoSitePlusQ6NV75
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GCR_153/162    GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    GPR153   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)GPR153
DMDM Disease mutations387509
Blocks (Seattle)GPR153
SuperfamilyQ6NV75
Human Protein AtlasENSG00000158292
Peptide AtlasQ6NV75
HPRD13600
IPIIPI00410442   IPI00976806   
Protein Interaction databases
DIP (DOE-UCLA)Q6NV75
IntAct (EBI)Q6NV75
FunCoupENSG00000158292
BioGRIDGPR153
STRING (EMBL)GPR153
ZODIACGPR153
Ontologies - Pathways
QuickGOQ6NV75
Ontology : AmiGOG-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  
Ontology : EGO-EBIG-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  
NDEx NetworkGPR153
Atlas of Cancer Signalling NetworkGPR153
Wikipedia pathwaysGPR153
Orthology - Evolution
OrthoDB387509
GeneTree (enSembl)ENSG00000158292
Phylogenetic Trees/Animal Genes : TreeFamGPR153
HOVERGENQ6NV75
HOGENOMQ6NV75
Homologs : HomoloGeneGPR153
Homology/Alignments : Family Browser (UCSC)GPR153
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPR153 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPR153
dbVarGPR153
ClinVarGPR153
1000_GenomesGPR153 
Exome Variant ServerGPR153
ExAC (Exome Aggregation Consortium)GPR153 (select the gene name)
Genetic variants : HAPMAP387509
Genomic Variants (DGV)GPR153 [DGVbeta]
DECIPHERGPR153 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGPR153 
Mutations
ICGC Data PortalGPR153 
TCGA Data PortalGPR153 
Broad Tumor PortalGPR153
OASIS PortalGPR153 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPR153  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPR153
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPR153
DgiDB (Drug Gene Interaction Database)GPR153
DoCM (Curated mutations)GPR153 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPR153 (select a term)
intoGenGPR153
Cancer3DGPR153(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614269   
Orphanet
MedgenGPR153
Genetic Testing Registry GPR153
NextProtQ6NV75 [Medical]
TSGene387509
GENETestsGPR153
Huge Navigator GPR153 [HugePedia]
snp3D : Map Gene to Disease387509
BioCentury BCIQGPR153
ClinGenGPR153
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD387509
Chemical/Pharm GKB GenePA134929175
Clinical trialGPR153
Miscellaneous
canSAR (ICR)GPR153 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR153
EVEXGPR153
GoPubMedGPR153
iHOPGPR153
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:14:20 CEST 2017

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