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GPR156 (G protein-coupled receptor 156)

Identity

Alias_symbol (synonym)PGR28
GABABL
Other alias
HGNC (Hugo) GPR156
LocusID (NCBI) 165829
Atlas_Id 63972
Location 3q13.33  [Link to chromosome band 3q13]
Location_base_pair Starts at 120165481 and ends at 120244295 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
GPR156 (3q13.33) / EPB41L2 (6q23.1)GPR156 (3q13.33) / GPR156 (3q13.33)GSK3B (3q13.33) / GPR156 (3q13.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPR156   20844
Cards
Entrez_Gene (NCBI)GPR156  165829  G protein-coupled receptor 156
AliasesGABABL; PGR28
GeneCards (Weizmann)GPR156
Ensembl hg19 (Hinxton)ENSG00000175697 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000175697 [Gene_View]  chr3:120165481-120244295 [Contig_View]  GPR156 [Vega]
ICGC DataPortalENSG00000175697
TCGA cBioPortalGPR156
AceView (NCBI)GPR156
Genatlas (Paris)GPR156
WikiGenes165829
SOURCE (Princeton)GPR156
Genetics Home Reference (NIH)GPR156
Genomic and cartography
GoldenPath hg38 (UCSC)GPR156  -     chr3:120165481-120244295 -  3q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPR156  -     3q13.33   [Description]    (hg19-Feb_2009)
EnsemblGPR156 - 3q13.33 [CytoView hg19]  GPR156 - 3q13.33 [CytoView hg38]
Mapping of homologs : NCBIGPR156 [Mapview hg19]  GPR156 [Mapview hg38]
OMIM610464   
Gene and transcription
Genbank (Entrez)AB209362 AF488739 AI201720 AK310204 AY255565
RefSeq transcript (Entrez)NM_001168271 NM_153002
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPR156
Cluster EST : UnigeneHs.333358 [ NCBI ]
CGAP (NCI)Hs.333358
Alternative Splicing GalleryENSG00000175697
Gene ExpressionGPR156 [ NCBI-GEO ]   GPR156 [ EBI - ARRAY_EXPRESS ]   GPR156 [ SEEK ]   GPR156 [ MEM ]
Gene Expression Viewer (FireBrowse)GPR156 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)165829
GTEX Portal (Tissue expression)GPR156
Human Protein AtlasENSG00000175697-GPR156 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NFN8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NFN8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NFN8
Splice isoforms : SwissVarQ8NFN8
PhosPhoSitePlusQ8NFN8
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F3_4 (PS50259)   
Domains : Interpro (EBI)GPCR3_GABA-B    GPCR_3_C   
Domain families : Pfam (Sanger)7tm_3 (PF00003)   
Domain families : Pfam (NCBI)pfam00003   
Conserved Domain (NCBI)GPR156
DMDM Disease mutations165829
Blocks (Seattle)GPR156
SuperfamilyQ8NFN8
Human Protein Atlas [tissue]ENSG00000175697-GPR156 [tissue]
Peptide AtlasQ8NFN8
HPRD17067
IPIIPI00168860   IPI00556019   IPI00944918   IPI00945227   
Protein Interaction databases
DIP (DOE-UCLA)Q8NFN8
IntAct (EBI)Q8NFN8
FunCoupENSG00000175697
BioGRIDGPR156
STRING (EMBL)GPR156
ZODIACGPR156
Ontologies - Pathways
QuickGOQ8NFN8
Ontology : AmiGOG-protein coupled GABA receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  
Ontology : EGO-EBIG-protein coupled GABA receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  
Pathways : KEGGNeuroactive ligand-receptor interaction   
NDEx NetworkGPR156
Atlas of Cancer Signalling NetworkGPR156
Wikipedia pathwaysGPR156
Orthology - Evolution
OrthoDB165829
GeneTree (enSembl)ENSG00000175697
Phylogenetic Trees/Animal Genes : TreeFamGPR156
HOVERGENQ8NFN8
HOGENOMQ8NFN8
Homologs : HomoloGeneGPR156
Homology/Alignments : Family Browser (UCSC)GPR156
Gene fusions - Rearrangements
Tumor Fusion PortalGPR156
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPR156 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPR156
dbVarGPR156
ClinVarGPR156
1000_GenomesGPR156 
Exome Variant ServerGPR156
ExAC (Exome Aggregation Consortium)ENSG00000175697
GNOMAD BrowserENSG00000175697
Genetic variants : HAPMAP165829
Genomic Variants (DGV)GPR156 [DGVbeta]
DECIPHERGPR156 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGPR156 
Mutations
ICGC Data PortalGPR156 
TCGA Data PortalGPR156 
Broad Tumor PortalGPR156
OASIS PortalGPR156 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPR156  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPR156
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPR156
DgiDB (Drug Gene Interaction Database)GPR156
DoCM (Curated mutations)GPR156 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPR156 (select a term)
intoGenGPR156
Cancer3DGPR156(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610464   
Orphanet
DisGeNETGPR156
MedgenGPR156
Genetic Testing Registry GPR156
NextProtQ8NFN8 [Medical]
TSGene165829
GENETestsGPR156
Target ValidationGPR156
Huge Navigator GPR156 [HugePedia]
snp3D : Map Gene to Disease165829
BioCentury BCIQGPR156
ClinGenGPR156
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD165829
Chemical/Pharm GKB GenePA134918005
Clinical trialGPR156
Miscellaneous
canSAR (ICR)GPR156 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR156
EVEXGPR156
GoPubMedGPR156
iHOPGPR156
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:07:33 CET 2017

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