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GPR157 (G protein-coupled receptor 157)

Identity

Alias_symbol (synonym)FLJ12132
Other alias-
HGNC (Hugo) GPR157
LocusID (NCBI) 80045
Atlas_Id 63973
Location 1p36.22  [Link to chromosome band 1p36]
Location_base_pair Starts at 9104417 and ends at 9129170 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GPR157 (1p36.23) / GON4L (1q22)GPR157 (1p36.23) / SIGMAR1 (9p13.3)LMBRD1 (6q13) / GPR157 (1p36.23)
NOP58 (2q33.1) / GPR157 (1p36.23)RERE (1p36.23) / GPR157 (1p36.23)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPR157   23687
Cards
Entrez_Gene (NCBI)GPR157  80045  G protein-coupled receptor 157
Aliases
GeneCards (Weizmann)GPR157
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:9104417-9129170 [Contig_View]  GPR157 [Vega]
TCGA cBioPortalGPR157
AceView (NCBI)GPR157
Genatlas (Paris)GPR157
WikiGenes80045
SOURCE (Princeton)GPR157
Genetics Home Reference (NIH)GPR157
Genomic and cartography
GoldenPath hg38 (UCSC)GPR157  -     chr1:9104417-9129170 -  1p36.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPR157  -     1p36.22   [Description]    (hg19-Feb_2009)
EnsemblGPR157 - 1p36.22 [CytoView hg19]  GPR157 - 1p36.22 [CytoView hg38]
Mapping of homologs : NCBIGPR157 [Mapview hg19]  GPR157 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK022194 AK026883 AK292888 AK304154 AY768808
RefSeq transcript (Entrez)NM_024980
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPR157
Cluster EST : UnigeneHs.632367 [ NCBI ]
CGAP (NCI)Hs.632367
Gene ExpressionGPR157 [ NCBI-GEO ]   GPR157 [ EBI - ARRAY_EXPRESS ]   GPR157 [ SEEK ]   GPR157 [ MEM ]
Gene Expression Viewer (FireBrowse)GPR157 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80045
GTEX Portal (Tissue expression)GPR157
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5UAW9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5UAW9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5UAW9
Splice isoforms : SwissVarQ5UAW9
PhosPhoSitePlusQ5UAW9
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F2_4 (PS50261)   
Domains : Interpro (EBI)GCR1-cAMP_receptor    GPCR_2-like    GPCR_2_secretin-like    GPCR_Rhodpsn_7TM   
Domain families : Pfam (Sanger)7tm_2 (PF00002)   
Domain families : Pfam (NCBI)pfam00002   
Conserved Domain (NCBI)GPR157
DMDM Disease mutations80045
Blocks (Seattle)GPR157
SuperfamilyQ5UAW9
Peptide AtlasQ5UAW9
HPRD17068
IPIIPI00478934   IPI00908554   IPI00604691   
Protein Interaction databases
DIP (DOE-UCLA)Q5UAW9
IntAct (EBI)Q5UAW9
BioGRIDGPR157
STRING (EMBL)GPR157
ZODIACGPR157
Ontologies - Pathways
QuickGOQ5UAW9
Ontology : AmiGOG-protein coupled receptor activity  cell surface receptor signaling pathway  G-protein coupled receptor signaling pathway  integral component of membrane  circadian behavior  positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway  radial glial cell differentiation  ciliary membrane  
Ontology : EGO-EBIG-protein coupled receptor activity  cell surface receptor signaling pathway  G-protein coupled receptor signaling pathway  integral component of membrane  circadian behavior  positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway  radial glial cell differentiation  ciliary membrane  
NDEx NetworkGPR157
Atlas of Cancer Signalling NetworkGPR157
Wikipedia pathwaysGPR157
Orthology - Evolution
OrthoDB80045
Phylogenetic Trees/Animal Genes : TreeFamGPR157
HOVERGENQ5UAW9
HOGENOMQ5UAW9
Homologs : HomoloGeneGPR157
Homology/Alignments : Family Browser (UCSC)GPR157
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPR157 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPR157
dbVarGPR157
ClinVarGPR157
1000_GenomesGPR157 
Exome Variant ServerGPR157
ExAC (Exome Aggregation Consortium)GPR157 (select the gene name)
Genetic variants : HAPMAP80045
Genomic Variants (DGV)GPR157 [DGVbeta]
DECIPHERGPR157 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGPR157 
Mutations
ICGC Data PortalGPR157 
TCGA Data PortalGPR157 
Broad Tumor PortalGPR157
OASIS PortalGPR157 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPR157  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPR157
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPR157
DgiDB (Drug Gene Interaction Database)GPR157
DoCM (Curated mutations)GPR157 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPR157 (select a term)
intoGenGPR157
Cancer3DGPR157(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGPR157
Genetic Testing Registry GPR157
NextProtQ5UAW9 [Medical]
TSGene80045
GENETestsGPR157
Target ValidationGPR157
Huge Navigator GPR157 [HugePedia]
snp3D : Map Gene to Disease80045
BioCentury BCIQGPR157
ClinGenGPR157
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80045
Chemical/Pharm GKB GenePA134876230
Clinical trialGPR157
Miscellaneous
canSAR (ICR)GPR157 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR157
EVEXGPR157
GoPubMedGPR157
iHOPGPR157
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:09:45 CEST 2017

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