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GPR176 (G protein-coupled receptor 176)

Identity

Alias_symbol (synonym)Gm1012
Other aliasHB-954
HGNC (Hugo) GPR176
LocusID (NCBI) 11245
Atlas_Id 63979
Location 15q14  [Link to chromosome band 15q14]
Location_base_pair Starts at 39799022 and ends at 39920892 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
EHD4 (15q15.1) / GPR176 (15q14)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPR176   32370
Cards
Entrez_Gene (NCBI)GPR176  11245  G protein-coupled receptor 176
AliasesHB-954
GeneCards (Weizmann)GPR176
Ensembl hg19 (Hinxton)ENSG00000166073 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166073 [Gene_View]  chr15:39799022-39920892 [Contig_View]  GPR176 [Vega]
ICGC DataPortalENSG00000166073
TCGA cBioPortalGPR176
AceView (NCBI)GPR176
Genatlas (Paris)GPR176
WikiGenes11245
SOURCE (Princeton)GPR176
Genetics Home Reference (NIH)GPR176
Genomic and cartography
GoldenPath hg38 (UCSC)GPR176  -     chr15:39799022-39920892 -  15q14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPR176  -     15q14   [Description]    (hg19-Feb_2009)
EnsemblGPR176 - 15q14 [CytoView hg19]  GPR176 - 15q14 [CytoView hg38]
Mapping of homologs : NCBIGPR176 [Mapview hg19]  GPR176 [Mapview hg38]
OMIM612183   
Gene and transcription
Genbank (Entrez)AK302715 BC067106 CB106487 D38449 JQ308174
RefSeq transcript (Entrez)NM_001271854 NM_001271855 NM_007223
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPR176
Cluster EST : UnigeneHs.37196 [ NCBI ]
CGAP (NCI)Hs.37196
Alternative Splicing GalleryENSG00000166073
Gene ExpressionGPR176 [ NCBI-GEO ]   GPR176 [ EBI - ARRAY_EXPRESS ]   GPR176 [ SEEK ]   GPR176 [ MEM ]
Gene Expression Viewer (FireBrowse)GPR176 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)11245
GTEX Portal (Tissue expression)GPR176
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14439   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14439  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14439
Splice isoforms : SwissVarQ14439
PhosPhoSitePlusQ14439
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)GPR176
DMDM Disease mutations11245
Blocks (Seattle)GPR176
SuperfamilyQ14439
Human Protein AtlasENSG00000166073
Peptide AtlasQ14439
HPRD13597
IPIIPI00027003   IPI00796235   
Protein Interaction databases
DIP (DOE-UCLA)Q14439
IntAct (EBI)Q14439
FunCoupENSG00000166073
BioGRIDGPR176
STRING (EMBL)GPR176
ZODIACGPR176
Ontologies - Pathways
QuickGOQ14439
Ontology : AmiGOG-protein coupled receptor activity  plasma membrane  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  chemical synaptic transmission  negative regulation of cAMP biosynthetic process  circadian behavior  
Ontology : EGO-EBIG-protein coupled receptor activity  plasma membrane  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  chemical synaptic transmission  negative regulation of cAMP biosynthetic process  circadian behavior  
NDEx NetworkGPR176
Atlas of Cancer Signalling NetworkGPR176
Wikipedia pathwaysGPR176
Orthology - Evolution
OrthoDB11245
GeneTree (enSembl)ENSG00000166073
Phylogenetic Trees/Animal Genes : TreeFamGPR176
HOVERGENQ14439
HOGENOMQ14439
Homologs : HomoloGeneGPR176
Homology/Alignments : Family Browser (UCSC)GPR176
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPR176 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPR176
dbVarGPR176
ClinVarGPR176
1000_GenomesGPR176 
Exome Variant ServerGPR176
ExAC (Exome Aggregation Consortium)GPR176 (select the gene name)
Genetic variants : HAPMAP11245
Genomic Variants (DGV)GPR176 [DGVbeta]
DECIPHERGPR176 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGPR176 
Mutations
ICGC Data PortalGPR176 
TCGA Data PortalGPR176 
Broad Tumor PortalGPR176
OASIS PortalGPR176 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPR176  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPR176
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPR176
DgiDB (Drug Gene Interaction Database)GPR176
DoCM (Curated mutations)GPR176 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPR176 (select a term)
intoGenGPR176
Cancer3DGPR176(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612183   
Orphanet
MedgenGPR176
Genetic Testing Registry GPR176
NextProtQ14439 [Medical]
TSGene11245
GENETestsGPR176
Target ValidationGPR176
Huge Navigator GPR176 [HugePedia]
snp3D : Map Gene to Disease11245
BioCentury BCIQGPR176
ClinGenGPR176
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD11245
Chemical/Pharm GKB GenePA142671712
Clinical trialGPR176
Miscellaneous
canSAR (ICR)GPR176 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR176
EVEXGPR176
GoPubMedGPR176
iHOPGPR176
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:09:46 CEST 2017

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