Atlas of Genetics and Cytogenetics in Oncology and Haematology


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GPR18 (G protein-coupled receptor 18)

Identity

Other names-
HGNC (Hugo) GPR18
LocusID (NCBI) 2841
Location 13q32.3
Location_base_pair Starts at 99906967 and ends at 99910682 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)GPR18   4472
Cards
Entrez_Gene (NCBI)GPR18  2841  G protein-coupled receptor 18
GeneCards (Weizmann)GPR18
Ensembl (Hinxton)ENSG00000125245 [Gene_View]  chr13:99906967-99910682 [Contig_View]  GPR18 [Vega]
ICGC DataPortalENSG00000125245
AceView (NCBI)GPR18
Genatlas (Paris)GPR18
WikiGenes2841
SOURCE (Princeton)NM_001098200 NM_005292
Genomic and cartography
GoldenPath (UCSC)GPR18  -  13q32.3   chr13:99906967-99910682 -  13q32.3   [Description]    (hg19-Feb_2009)
EnsemblGPR18 - 13q32.3 [CytoView]
Mapping of homologs : NCBIGPR18 [Mapview]
OMIM602042   
Gene and transcription
Genbank (Entrez)AA825595 AF261135 AF339781 BC008569 BC050646
RefSeq transcript (Entrez)NM_001098200 NM_005292
RefSeq genomic (Entrez)AC_000145 NC_000013 NC_018924 NT_009952 NW_001838084 NW_004929389
Consensus coding sequences : CCDS (NCBI)GPR18
Cluster EST : UnigeneHs.741589 [ NCBI ]
CGAP (NCI)Hs.741589
Alternative Splicing : Fast-db (Paris)GSHG0008603
Alternative Splicing GalleryENSG00000125245
Gene ExpressionGPR18 [ NCBI-GEO ]     GPR18 [ SEEK ]   GPR18 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14330 (Uniprot)
NextProtQ14330  [Medical]
With graphics : InterProQ14330
Splice isoforms : SwissVarQ14330 (Swissvar)
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    GPR18   
Related proteins : CluSTrQ14330
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
DMDM Disease mutations2841
Blocks (Seattle)Q14330
Human Protein AtlasENSG00000125245
Peptide AtlasQ14330
HPRD03621
IPIIPI00555618   IPI00640571   
Protein Interaction databases
DIP (DOE-UCLA)Q14330
IntAct (EBI)Q14330
FunCoupENSG00000125245
BioGRIDGPR18
InParanoidQ14330
Interologous Interaction database Q14330
IntegromeDBGPR18
STRING (EMBL)GPR18
Ontologies - Pathways
Ontology : AmiGOG-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  
Ontology : EGO-EBIG-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  
Protein Interaction DatabaseGPR18
Wikipedia pathwaysGPR18
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)GPR18
SNP (GeneSNP Utah)GPR18
SNP : HGBaseGPR18
Genetic variants : HAPMAPGPR18
1000_GenomesGPR18 
ICGC programENSG00000125245 
CONAN: Copy Number AnalysisGPR18 
Somatic Mutations in Cancer : COSMICGPR18 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
Mutations and Diseases : HGMDGPR18
OMIM602042   
MedgenGPR18
GENETestsGPR18
Disease Genetic AssociationGPR18
Huge Navigator GPR18 [HugePedia]  GPR18 [HugeCancerGEM]
Genomic VariantsGPR18  GPR18 [DGVbeta]
Exome VariantGPR18
dbVarGPR18
ClinVarGPR18
snp3D : Map Gene to Disease2841
General knowledge
Homologs : HomoloGeneGPR18
Homology/Alignments : Family Browser (UCSC)GPR18
Phylogenetic Trees/Animal Genes : TreeFamGPR18
Chemical/Protein Interactions : CTD2841
Chemical/Pharm GKB GenePA28860
Clinical trialGPR18
Cancer Resource (Charite)ENSG00000125245
Other databases
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
CoreMineGPR18
iHOPGPR18
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 13 12:49:05 CEST 2014

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