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GPR25 (G protein-coupled receptor 25)

Identity

Other alias-
HGNC (Hugo) GPR25
LocusID (NCBI) 2848
Atlas_Id 63987
Location 1q32.1  [Link to chromosome band 1q32]
Location_base_pair Starts at 200872955 and ends at 200874178 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPR25   4480
Cards
Entrez_Gene (NCBI)GPR25  2848  G protein-coupled receptor 25
Aliases
GeneCards (Weizmann)GPR25
Ensembl hg19 (Hinxton)ENSG00000170128 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000170128 [Gene_View]  chr1:200872955-200874178 [Contig_View]  GPR25 [Vega]
ICGC DataPortalENSG00000170128
TCGA cBioPortalGPR25
AceView (NCBI)GPR25
Genatlas (Paris)GPR25
WikiGenes2848
SOURCE (Princeton)GPR25
Genetics Home Reference (NIH)GPR25
Genomic and cartography
GoldenPath hg38 (UCSC)GPR25  -     chr1:200872955-200874178 +  1q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPR25  -     1q32.1   [Description]    (hg19-Feb_2009)
EnsemblGPR25 - 1q32.1 [CytoView hg19]  GPR25 - 1q32.1 [CytoView hg38]
Mapping of homologs : NCBIGPR25 [Mapview hg19]  GPR25 [Mapview hg38]
OMIM602174   
Gene and transcription
Genbank (Entrez)AK315339 BC126386 BC126388
RefSeq transcript (Entrez)NM_005298
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPR25
Cluster EST : UnigeneHs.534316 [ NCBI ]
CGAP (NCI)Hs.534316
Alternative Splicing GalleryENSG00000170128
Gene ExpressionGPR25 [ NCBI-GEO ]   GPR25 [ EBI - ARRAY_EXPRESS ]   GPR25 [ SEEK ]   GPR25 [ MEM ]
Gene Expression Viewer (FireBrowse)GPR25 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2848
GTEX Portal (Tissue expression)GPR25
Protein : pattern, domain, 3D structure
UniProt/SwissProtO00155   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO00155  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO00155
Splice isoforms : SwissVarO00155
PhosPhoSitePlusO00155
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)GPR25
DMDM Disease mutations2848
Blocks (Seattle)GPR25
SuperfamilyO00155
Human Protein AtlasENSG00000170128
Peptide AtlasO00155
HPRD03707
IPIIPI00010416   
Protein Interaction databases
DIP (DOE-UCLA)O00155
IntAct (EBI)O00155
FunCoupENSG00000170128
BioGRIDGPR25
STRING (EMBL)GPR25
ZODIACGPR25
Ontologies - Pathways
QuickGOO00155
Ontology : AmiGOG-protein coupled receptor activity  protein binding  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  
Ontology : EGO-EBIG-protein coupled receptor activity  protein binding  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  
NDEx NetworkGPR25
Atlas of Cancer Signalling NetworkGPR25
Wikipedia pathwaysGPR25
Orthology - Evolution
OrthoDB2848
GeneTree (enSembl)ENSG00000170128
Phylogenetic Trees/Animal Genes : TreeFamGPR25
HOVERGENO00155
HOGENOMO00155
Homologs : HomoloGeneGPR25
Homology/Alignments : Family Browser (UCSC)GPR25
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPR25 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPR25
dbVarGPR25
ClinVarGPR25
1000_GenomesGPR25 
Exome Variant ServerGPR25
ExAC (Exome Aggregation Consortium)GPR25 (select the gene name)
Genetic variants : HAPMAP2848
Genomic Variants (DGV)GPR25 [DGVbeta]
DECIPHERGPR25 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGPR25 
Mutations
ICGC Data PortalGPR25 
TCGA Data PortalGPR25 
Broad Tumor PortalGPR25
OASIS PortalGPR25 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPR25  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPR25
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPR25
DgiDB (Drug Gene Interaction Database)GPR25
DoCM (Curated mutations)GPR25 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPR25 (select a term)
intoGenGPR25
Cancer3DGPR25(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602174   
Orphanet
MedgenGPR25
Genetic Testing Registry GPR25
NextProtO00155 [Medical]
TSGene2848
GENETestsGPR25
Target ValidationGPR25
Huge Navigator GPR25 [HugePedia]
snp3D : Map Gene to Disease2848
BioCentury BCIQGPR25
ClinGenGPR25
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2848
Chemical/Pharm GKB GenePA28868
Clinical trialGPR25
Miscellaneous
canSAR (ICR)GPR25 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR25
EVEXGPR25
GoPubMedGPR25
iHOPGPR25
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 16:16:33 CEST 2017

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