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GPR33 (G protein-coupled receptor 33 (gene/pseudogene))

Identity

Alias_namesG protein-coupled receptor 33, pseudogene
G protein-coupled receptor 33 pseudogene
G protein-coupled receptor 33
Other alias-
HGNC (Hugo) GPR33
LocusID (NCBI) 2856
Atlas_Id 63992
Location 14q12  [Link to chromosome band 14q12]
Location_base_pair Starts at 31482944 and ends at 31487945 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPR33   4489
Cards
Entrez_Gene (NCBI)GPR33  2856  G protein-coupled receptor 33 (gene/pseudogene)
Aliases
GeneCards (Weizmann)GPR33
Ensembl hg19 (Hinxton)ENSG00000214943 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214943 [Gene_View]  chr14:31482944-31487945 [Contig_View]  GPR33 [Vega]
ICGC DataPortalENSG00000214943
TCGA cBioPortalGPR33
AceView (NCBI)GPR33
Genatlas (Paris)GPR33
WikiGenes2856
SOURCE (Princeton)GPR33
Genetics Home Reference (NIH)GPR33
Genomic and cartography
GoldenPath hg38 (UCSC)GPR33  -     chr14:31482944-31487945 -  14q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPR33  -     14q12   [Description]    (hg19-Feb_2009)
EnsemblGPR33 - 14q12 [CytoView hg19]  GPR33 - 14q12 [CytoView hg38]
Mapping of homologs : NCBIGPR33 [Mapview hg19]  GPR33 [Mapview hg38]
OMIM610118   
Gene and transcription
Genbank (Entrez)GQ981321 GQ981322
RefSeq transcript (Entrez)NM_001197184
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPR33
Cluster EST : UnigeneHs.727479 [ NCBI ]
CGAP (NCI)Hs.727479
Alternative Splicing GalleryENSG00000214943
Gene ExpressionGPR33 [ NCBI-GEO ]   GPR33 [ EBI - ARRAY_EXPRESS ]   GPR33 [ SEEK ]   GPR33 [ MEM ]
Gene Expression Viewer (FireBrowse)GPR33 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2856
GTEX Portal (Tissue expression)GPR33
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ49SQ1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ49SQ1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ49SQ1
Splice isoforms : SwissVarQ49SQ1
PhosPhoSitePlusQ49SQ1
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)Formyl_rcpt-rel    GPCR_Rhodpsn    GPCR_Rhodpsn_7TM   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)GPR33
DMDM Disease mutations2856
Blocks (Seattle)GPR33
SuperfamilyQ49SQ1
Human Protein AtlasENSG00000214943
Peptide AtlasQ49SQ1
IPIIPI00640769   
Protein Interaction databases
DIP (DOE-UCLA)Q49SQ1
IntAct (EBI)Q49SQ1
FunCoupENSG00000214943
BioGRIDGPR33
STRING (EMBL)GPR33
ZODIACGPR33
Ontologies - Pathways
QuickGOQ49SQ1
Ontology : AmiGOcomplement receptor mediated signaling pathway  complement receptor activity  G-protein coupled receptor activity  integral component of plasma membrane  inflammatory response  phospholipase C-activating G-protein coupled receptor signaling pathway  positive regulation of cytosolic calcium ion concentration  leukocyte migration  cell chemotaxis  
Ontology : EGO-EBIcomplement receptor mediated signaling pathway  complement receptor activity  G-protein coupled receptor activity  integral component of plasma membrane  inflammatory response  phospholipase C-activating G-protein coupled receptor signaling pathway  positive regulation of cytosolic calcium ion concentration  leukocyte migration  cell chemotaxis  
NDEx NetworkGPR33
Atlas of Cancer Signalling NetworkGPR33
Wikipedia pathwaysGPR33
Orthology - Evolution
OrthoDB2856
GeneTree (enSembl)ENSG00000214943
Phylogenetic Trees/Animal Genes : TreeFamGPR33
HOVERGENQ49SQ1
HOGENOMQ49SQ1
Homologs : HomoloGeneGPR33
Homology/Alignments : Family Browser (UCSC)GPR33
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPR33 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPR33
dbVarGPR33
ClinVarGPR33
1000_GenomesGPR33 
Exome Variant ServerGPR33
ExAC (Exome Aggregation Consortium)GPR33 (select the gene name)
Genetic variants : HAPMAP2856
Genomic Variants (DGV)GPR33 [DGVbeta]
DECIPHERGPR33 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGPR33 
Mutations
ICGC Data PortalGPR33 
TCGA Data PortalGPR33 
Broad Tumor PortalGPR33
OASIS PortalGPR33 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDGPR33
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPR33
DgiDB (Drug Gene Interaction Database)GPR33
DoCM (Curated mutations)GPR33 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPR33 (select a term)
intoGenGPR33
Cancer3DGPR33(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610118   
Orphanet
MedgenGPR33
Genetic Testing Registry GPR33
NextProtQ49SQ1 [Medical]
TSGene2856
GENETestsGPR33
Target ValidationGPR33
Huge Navigator GPR33 [HugePedia]
snp3D : Map Gene to Disease2856
BioCentury BCIQGPR33
ClinGenGPR33
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2856
Chemical/Pharm GKB GenePA28877
Clinical trialGPR33
Miscellaneous
canSAR (ICR)GPR33 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR33
EVEXGPR33
GoPubMedGPR33
iHOPGPR33
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 16:16:34 CEST 2017

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