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GPR45 (G protein-coupled receptor 45)

Identity

Alias_symbol (synonym)PSP24
PSP24A
Other aliasPSP24(ALPHA)
HGNC (Hugo) GPR45
LocusID (NCBI) 11250
Atlas_Id 63997
Location 2q12.1  [Link to chromosome band 2q12]
Location_base_pair Starts at 105858200 and ends at 105859924 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPR45   4503
Cards
Entrez_Gene (NCBI)GPR45  11250  G protein-coupled receptor 45
AliasesPSP24; PSP24(ALPHA); PSP24A
GeneCards (Weizmann)GPR45
Ensembl hg19 (Hinxton) [Gene_View]  chr2:105858200-105859924 [Contig_View]  GPR45 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:105858200-105859924 [Contig_View]  GPR45 [Vega]
TCGA cBioPortalGPR45
AceView (NCBI)GPR45
Genatlas (Paris)GPR45
WikiGenes11250
SOURCE (Princeton)GPR45
Genetics Home Reference (NIH)GPR45
Genomic and cartography
GoldenPath hg19 (UCSC)GPR45  -     chr2:105858200-105859924 +  2q12.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GPR45  -     2q12.1   [Description]    (hg38-Dec_2013)
EnsemblGPR45 - 2q12.1 [CytoView hg19]  GPR45 - 2q12.1 [CytoView hg38]
Mapping of homologs : NCBIGPR45 [Mapview hg19]  GPR45 [Mapview hg38]
OMIM604838   
Gene and transcription
Genbank (Entrez)BC066879 BC066880 BC067455 EU883573 U92642
RefSeq transcript (Entrez)NM_007227
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_005403 NW_004929303
Consensus coding sequences : CCDS (NCBI)GPR45
Cluster EST : UnigeneHs.590903 [ NCBI ]
CGAP (NCI)Hs.590903
Gene ExpressionGPR45 [ NCBI-GEO ]   GPR45 [ EBI - ARRAY_EXPRESS ]   GPR45 [ SEEK ]   GPR45 [ MEM ]
Gene Expression Viewer (FireBrowse)GPR45 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)11250
GTEX Portal (Tissue expression)GPR45
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y5Y3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y5Y3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y5Y3
Splice isoforms : SwissVarQ9Y5Y3
PhosPhoSitePlusQ9Y5Y3
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)GPR45
DMDM Disease mutations11250
Blocks (Seattle)GPR45
SuperfamilyQ9Y5Y3
Peptide AtlasQ9Y5Y3
HPRD05325
IPIIPI00419887   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y5Y3
IntAct (EBI)Q9Y5Y3
BioGRIDGPR45
STRING (EMBL)GPR45
ZODIACGPR45
Ontologies - Pathways
QuickGOQ9Y5Y3
Ontology : AmiGOG-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  
Ontology : EGO-EBIG-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  
NDEx NetworkGPR45
Atlas of Cancer Signalling NetworkGPR45
Wikipedia pathwaysGPR45
Orthology - Evolution
OrthoDB11250
Phylogenetic Trees/Animal Genes : TreeFamGPR45
HOVERGENQ9Y5Y3
HOGENOMQ9Y5Y3
Homologs : HomoloGeneGPR45
Homology/Alignments : Family Browser (UCSC)GPR45
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPR45 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPR45
dbVarGPR45
ClinVarGPR45
1000_GenomesGPR45 
Exome Variant ServerGPR45
ExAC (Exome Aggregation Consortium)GPR45 (select the gene name)
Genetic variants : HAPMAP11250
Genomic Variants (DGV)GPR45 [DGVbeta]
DECIPHER (Syndromes)2:105858200-105859924  
CONAN: Copy Number AnalysisGPR45 
Mutations
ICGC Data PortalGPR45 
TCGA Data PortalGPR45 
Broad Tumor PortalGPR45
OASIS PortalGPR45 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPR45  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPR45
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPR45
DgiDB (Drug Gene Interaction Database)GPR45
DoCM (Curated mutations)GPR45 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPR45 (select a term)
intoGenGPR45
Cancer3DGPR45(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604838   
Orphanet
MedgenGPR45
Genetic Testing Registry GPR45
NextProtQ9Y5Y3 [Medical]
TSGene11250
GENETestsGPR45
Huge Navigator GPR45 [HugePedia]
snp3D : Map Gene to Disease11250
BioCentury BCIQGPR45
ClinGenGPR45
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD11250
Chemical/Pharm GKB GenePA28892
Clinical trialGPR45
Miscellaneous
canSAR (ICR)GPR45 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR45
EVEXGPR45
GoPubMedGPR45
iHOPGPR45
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:06:46 CET 2017

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