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GPR62 (G protein-coupled receptor 62)

Identity

Other aliasGPCR8
KPG_005
HGNC (Hugo) GPR62
LocusID (NCBI) 118442
Atlas_Id 64002
Location 3p21.2  [Link to chromosome band 3p21]
Location_base_pair Starts at 51989330 and ends at 51991520 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPR62   13301
Cards
Entrez_Gene (NCBI)GPR62  118442  G protein-coupled receptor 62
AliasesGPCR8; KPG_005
GeneCards (Weizmann)GPR62
Ensembl hg19 (Hinxton)ENSG00000180929 [Gene_View]  chr3:51989330-51991520 [Contig_View]  GPR62 [Vega]
Ensembl hg38 (Hinxton)ENSG00000180929 [Gene_View]  chr3:51989330-51991520 [Contig_View]  GPR62 [Vega]
ICGC DataPortalENSG00000180929
TCGA cBioPortalGPR62
AceView (NCBI)GPR62
Genatlas (Paris)GPR62
WikiGenes118442
SOURCE (Princeton)GPR62
Genetics Home Reference (NIH)GPR62
Genomic and cartography
GoldenPath hg19 (UCSC)GPR62  -     chr3:51989330-51991520 +  3p21.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GPR62  -     3p21.2   [Description]    (hg38-Dec_2013)
EnsemblGPR62 - 3p21.2 [CytoView hg19]  GPR62 - 3p21.2 [CytoView hg38]
Mapping of homologs : NCBIGPR62 [Mapview hg19]  GPR62 [Mapview hg38]
OMIM606917   
Gene and transcription
Genbank (Entrez)AB032600 AI951672 BC026357 HQ709188
RefSeq transcript (Entrez)NM_080865
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_022517 NW_004929309
Consensus coding sequences : CCDS (NCBI)GPR62
Cluster EST : UnigeneHs.232213 [ NCBI ]
CGAP (NCI)Hs.232213
Alternative Splicing GalleryENSG00000180929
Gene ExpressionGPR62 [ NCBI-GEO ]   GPR62 [ EBI - ARRAY_EXPRESS ]   GPR62 [ SEEK ]   GPR62 [ MEM ]
Gene Expression Viewer (FireBrowse)GPR62 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)118442
GTEX Portal (Tissue expression)GPR62
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BZJ7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BZJ7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BZJ7
Splice isoforms : SwissVarQ9BZJ7
PhosPhoSitePlusQ9BZJ7
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)GPR62
DMDM Disease mutations118442
Blocks (Seattle)GPR62
SuperfamilyQ9BZJ7
Human Protein AtlasENSG00000180929
Peptide AtlasQ9BZJ7
HPRD06078
IPIIPI00289120   
Protein Interaction databases
DIP (DOE-UCLA)Q9BZJ7
IntAct (EBI)Q9BZJ7
FunCoupENSG00000180929
BioGRIDGPR62
STRING (EMBL)GPR62
ZODIACGPR62
Ontologies - Pathways
QuickGOQ9BZJ7
Ontology : AmiGOG-protein coupled receptor activity  cellular_component  plasma membrane  G-protein coupled receptor signaling pathway  biological_process  integral component of membrane  receptor complex  
Ontology : EGO-EBIG-protein coupled receptor activity  cellular_component  plasma membrane  G-protein coupled receptor signaling pathway  biological_process  integral component of membrane  receptor complex  
NDEx NetworkGPR62
Atlas of Cancer Signalling NetworkGPR62
Wikipedia pathwaysGPR62
Orthology - Evolution
OrthoDB118442
GeneTree (enSembl)ENSG00000180929
Phylogenetic Trees/Animal Genes : TreeFamGPR62
HOVERGENQ9BZJ7
HOGENOMQ9BZJ7
Homologs : HomoloGeneGPR62
Homology/Alignments : Family Browser (UCSC)GPR62
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPR62 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPR62
dbVarGPR62
ClinVarGPR62
1000_GenomesGPR62 
Exome Variant ServerGPR62
ExAC (Exome Aggregation Consortium)GPR62 (select the gene name)
Genetic variants : HAPMAP118442
Genomic Variants (DGV)GPR62 [DGVbeta]
DECIPHER (Syndromes)3:51989330-51991520  ENSG00000180929
CONAN: Copy Number AnalysisGPR62 
Mutations
ICGC Data PortalGPR62 
TCGA Data PortalGPR62 
Broad Tumor PortalGPR62
OASIS PortalGPR62 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPR62  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPR62
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPR62
DgiDB (Drug Gene Interaction Database)GPR62
DoCM (Curated mutations)GPR62 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPR62 (select a term)
intoGenGPR62
Cancer3DGPR62(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606917   
Orphanet
MedgenGPR62
Genetic Testing Registry GPR62
NextProtQ9BZJ7 [Medical]
TSGene118442
GENETestsGPR62
Huge Navigator GPR62 [HugePedia]
snp3D : Map Gene to Disease118442
BioCentury BCIQGPR62
ClinGenGPR62
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD118442
Chemical/Pharm GKB GenePA28906
Clinical trialGPR62
Miscellaneous
canSAR (ICR)GPR62 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR62
EVEXGPR62
GoPubMedGPR62
iHOPGPR62
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:06:47 CET 2017

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