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GPR82 (G protein-coupled receptor 82)

Identity

Other alias-
HGNC (Hugo) GPR82
LocusID (NCBI) 27197
Atlas_Id 64007
Location Xp11.4  [Link to chromosome band Xp11]
Location_base_pair Starts at 41724155 and ends at 41730135 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPR82   4533
Cards
Entrez_Gene (NCBI)GPR82  27197  G protein-coupled receptor 82
Aliases
GeneCards (Weizmann)GPR82
Ensembl hg19 (Hinxton)ENSG00000171657 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171657 [Gene_View]  chrX:41724155-41730135 [Contig_View]  GPR82 [Vega]
ICGC DataPortalENSG00000171657
TCGA cBioPortalGPR82
AceView (NCBI)GPR82
Genatlas (Paris)GPR82
WikiGenes27197
SOURCE (Princeton)GPR82
Genetics Home Reference (NIH)GPR82
Genomic and cartography
GoldenPath hg38 (UCSC)GPR82  -     chrX:41724155-41730135 +  Xp11.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPR82  -     Xp11.4   [Description]    (hg19-Feb_2009)
EnsemblGPR82 - Xp11.4 [CytoView hg19]  GPR82 - Xp11.4 [CytoView hg38]
Mapping of homologs : NCBIGPR82 [Mapview hg19]  GPR82 [Mapview hg38]
OMIM300748   
Gene and transcription
Genbank (Entrez)AJ319076 AK122626 AK313702 AL832460 BC070180
RefSeq transcript (Entrez)NM_080817
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPR82
Cluster EST : UnigeneHs.567457 [ NCBI ]
CGAP (NCI)Hs.567457
Alternative Splicing GalleryENSG00000171657
Gene ExpressionGPR82 [ NCBI-GEO ]   GPR82 [ EBI - ARRAY_EXPRESS ]   GPR82 [ SEEK ]   GPR82 [ MEM ]
Gene Expression Viewer (FireBrowse)GPR82 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)27197
GTEX Portal (Tissue expression)GPR82
Human Protein AtlasENSG00000171657-GPR82 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96P67   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96P67  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96P67
Splice isoforms : SwissVarQ96P67
PhosPhoSitePlusQ96P67
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)GPR82
DMDM Disease mutations27197
Blocks (Seattle)GPR82
SuperfamilyQ96P67
Human Protein Atlas [tissue]ENSG00000171657-GPR82 [tissue]
Peptide AtlasQ96P67
HPRD06084
IPIIPI00044281   
Protein Interaction databases
DIP (DOE-UCLA)Q96P67
IntAct (EBI)Q96P67
FunCoupENSG00000171657
BioGRIDGPR82
STRING (EMBL)GPR82
ZODIACGPR82
Ontologies - Pathways
QuickGOQ96P67
Ontology : AmiGOG-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  
Ontology : EGO-EBIG-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  
NDEx NetworkGPR82
Atlas of Cancer Signalling NetworkGPR82
Wikipedia pathwaysGPR82
Orthology - Evolution
OrthoDB27197
GeneTree (enSembl)ENSG00000171657
Phylogenetic Trees/Animal Genes : TreeFamGPR82
HOVERGENQ96P67
HOGENOMQ96P67
Homologs : HomoloGeneGPR82
Homology/Alignments : Family Browser (UCSC)GPR82
Gene fusions - Rearrangements
Tumor Fusion PortalGPR82
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPR82 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPR82
dbVarGPR82
ClinVarGPR82
1000_GenomesGPR82 
Exome Variant ServerGPR82
ExAC (Exome Aggregation Consortium)ENSG00000171657
GNOMAD BrowserENSG00000171657
Genetic variants : HAPMAP27197
Genomic Variants (DGV)GPR82 [DGVbeta]
DECIPHERGPR82 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGPR82 
Mutations
ICGC Data PortalGPR82 
TCGA Data PortalGPR82 
Broad Tumor PortalGPR82
OASIS PortalGPR82 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPR82  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPR82
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch GPR82
DgiDB (Drug Gene Interaction Database)GPR82
DoCM (Curated mutations)GPR82 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPR82 (select a term)
intoGenGPR82
Cancer3DGPR82(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300748   
Orphanet
DisGeNETGPR82
MedgenGPR82
Genetic Testing Registry GPR82
NextProtQ96P67 [Medical]
TSGene27197
GENETestsGPR82
Target ValidationGPR82
Huge Navigator GPR82 [HugePedia]
snp3D : Map Gene to Disease27197
BioCentury BCIQGPR82
ClinGenGPR82
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD27197
Chemical/Pharm GKB GenePA28926
Clinical trialGPR82
Miscellaneous
canSAR (ICR)GPR82 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR82
EVEXGPR82
GoPubMedGPR82
iHOPGPR82
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 19:31:52 CET 2017

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