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GPR83 (G protein-coupled receptor 83)

Identity

Alias_namesGPR72
G protein-coupled receptor 72
Other aliasGIR
HGNC (Hugo) GPR83
LocusID (NCBI) 10888
Atlas_Id 64008
Location 11q21  [Link to chromosome band 11q21]
Location_base_pair Starts at 94377311 and ends at 94401423 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPR83   4523
Cards
Entrez_Gene (NCBI)GPR83  10888  G protein-coupled receptor 83
AliasesGIR; GPR72
GeneCards (Weizmann)GPR83
Ensembl hg19 (Hinxton)ENSG00000123901 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000123901 [Gene_View]  chr11:94377311-94401423 [Contig_View]  GPR83 [Vega]
ICGC DataPortalENSG00000123901
TCGA cBioPortalGPR83
AceView (NCBI)GPR83
Genatlas (Paris)GPR83
WikiGenes10888
SOURCE (Princeton)GPR83
Genetics Home Reference (NIH)GPR83
Genomic and cartography
GoldenPath hg38 (UCSC)GPR83  -     chr11:94377311-94401423 -  11q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPR83  -     11q21   [Description]    (hg19-Feb_2009)
EnsemblGPR83 - 11q21 [CytoView hg19]  GPR83 - 11q21 [CytoView hg38]
Mapping of homologs : NCBIGPR83 [Mapview hg19]  GPR83 [Mapview hg38]
OMIM605569   
Gene and transcription
Genbank (Entrez)AB040973 AF236081 AI914177 AK315161 BC067473
RefSeq transcript (Entrez)NM_001330345 NM_016540
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPR83
Cluster EST : UnigeneHs.272385 [ NCBI ]
CGAP (NCI)Hs.272385
Alternative Splicing GalleryENSG00000123901
Gene ExpressionGPR83 [ NCBI-GEO ]   GPR83 [ EBI - ARRAY_EXPRESS ]   GPR83 [ SEEK ]   GPR83 [ MEM ]
Gene Expression Viewer (FireBrowse)GPR83 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10888
GTEX Portal (Tissue expression)GPR83
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NYM4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NYM4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NYM4
Splice isoforms : SwissVarQ9NYM4
PhosPhoSitePlusQ9NYM4
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    NPY_rcpt   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Domain families : Smart (EMBL)7TM_GPCR_Srsx (SM01381)  
Conserved Domain (NCBI)GPR83
DMDM Disease mutations10888
Blocks (Seattle)GPR83
SuperfamilyQ9NYM4
Human Protein AtlasENSG00000123901
Peptide AtlasQ9NYM4
HPRD16125
IPIIPI00021052   IPI01011645   
Protein Interaction databases
DIP (DOE-UCLA)Q9NYM4
IntAct (EBI)Q9NYM4
FunCoupENSG00000123901
BioGRIDGPR83
STRING (EMBL)GPR83
ZODIACGPR83
Ontologies - Pathways
QuickGOQ9NYM4
Ontology : AmiGOG-protein coupled receptor activity  neuropeptide Y receptor activity  plasma membrane  neuropeptide signaling pathway  integral component of membrane  response to glucocorticoid  non-motile cilium  
Ontology : EGO-EBIG-protein coupled receptor activity  neuropeptide Y receptor activity  plasma membrane  neuropeptide signaling pathway  integral component of membrane  response to glucocorticoid  non-motile cilium  
Pathways : KEGGNeuroactive ligand-receptor interaction   
NDEx NetworkGPR83
Atlas of Cancer Signalling NetworkGPR83
Wikipedia pathwaysGPR83
Orthology - Evolution
OrthoDB10888
GeneTree (enSembl)ENSG00000123901
Phylogenetic Trees/Animal Genes : TreeFamGPR83
HOVERGENQ9NYM4
HOGENOMQ9NYM4
Homologs : HomoloGeneGPR83
Homology/Alignments : Family Browser (UCSC)GPR83
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPR83 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPR83
dbVarGPR83
ClinVarGPR83
1000_GenomesGPR83 
Exome Variant ServerGPR83
ExAC (Exome Aggregation Consortium)GPR83 (select the gene name)
Genetic variants : HAPMAP10888
Genomic Variants (DGV)GPR83 [DGVbeta]
DECIPHERGPR83 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGPR83 
Mutations
ICGC Data PortalGPR83 
TCGA Data PortalGPR83 
Broad Tumor PortalGPR83
OASIS PortalGPR83 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPR83  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPR83
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPR83
DgiDB (Drug Gene Interaction Database)GPR83
DoCM (Curated mutations)GPR83 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPR83 (select a term)
intoGenGPR83
Cancer3DGPR83(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605569   
Orphanet
MedgenGPR83
Genetic Testing Registry GPR83
NextProtQ9NYM4 [Medical]
TSGene10888
GENETestsGPR83
Target ValidationGPR83
Huge Navigator GPR83 [HugePedia]
snp3D : Map Gene to Disease10888
BioCentury BCIQGPR83
ClinGenGPR83
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10888
Chemical/Pharm GKB GenePA28927
Clinical trialGPR83
Miscellaneous
canSAR (ICR)GPR83 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR83
EVEXGPR83
GoPubMedGPR83
iHOPGPR83
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:51:20 CEST 2017

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