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GPR84 (G protein-coupled receptor 84)

Identity

Alias_symbol (synonym)EX33
Other aliasGPCR4
HGNC (Hugo) GPR84
LocusID (NCBI) 53831
Atlas_Id 55088
Location 12q13.13  [Link to chromosome band 12q13]
Location_base_pair Starts at 54362445 and ends at 54364486 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPR84   4535
Cards
Entrez_Gene (NCBI)GPR84  53831  G protein-coupled receptor 84
AliasesEX33; GPCR4
GeneCards (Weizmann)GPR84
Ensembl hg19 (Hinxton)ENSG00000139572 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000139572 [Gene_View]  chr12:54362445-54364486 [Contig_View]  GPR84 [Vega]
ICGC DataPortalENSG00000139572
TCGA cBioPortalGPR84
AceView (NCBI)GPR84
Genatlas (Paris)GPR84
WikiGenes53831
SOURCE (Princeton)GPR84
Genetics Home Reference (NIH)GPR84
Genomic and cartography
GoldenPath hg38 (UCSC)GPR84  -     chr12:54362445-54364486 -  12q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPR84  -     12q13.13   [Description]    (hg19-Feb_2009)
EnsemblGPR84 - 12q13.13 [CytoView hg19]  GPR84 - 12q13.13 [CytoView hg38]
Mapping of homologs : NCBIGPR84 [Mapview hg19]  GPR84 [Mapview hg38]
OMIM606383   
Gene and transcription
Genbank (Entrez)AF237762 AF282693 AK290394 BC020614 BP303386
RefSeq transcript (Entrez)NM_020370
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPR84
Cluster EST : UnigeneHs.306199 [ NCBI ]
CGAP (NCI)Hs.306199
Alternative Splicing GalleryENSG00000139572
Gene ExpressionGPR84 [ NCBI-GEO ]   GPR84 [ EBI - ARRAY_EXPRESS ]   GPR84 [ SEEK ]   GPR84 [ MEM ]
Gene Expression Viewer (FireBrowse)GPR84 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)53831
GTEX Portal (Tissue expression)GPR84
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NQS5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NQS5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NQS5
Splice isoforms : SwissVarQ9NQS5
PhosPhoSitePlusQ9NQS5
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)GPR84
DMDM Disease mutations53831
Blocks (Seattle)GPR84
SuperfamilyQ9NQS5
Human Protein AtlasENSG00000139572
Peptide AtlasQ9NQS5
HPRD16213
IPIIPI00006903   IPI00977691   
Protein Interaction databases
DIP (DOE-UCLA)Q9NQS5
IntAct (EBI)Q9NQS5
FunCoupENSG00000139572
BioGRIDGPR84
STRING (EMBL)GPR84
ZODIACGPR84
Ontologies - Pathways
QuickGOQ9NQS5
Ontology : AmiGOgalanin receptor activity  plasma membrane  integral component of plasma membrane  adenylate cyclase-modulating G-protein coupled receptor signaling pathway  phospholipase C-activating G-protein coupled receptor signaling pathway  neuropeptide signaling pathway  biological_process  specific granule membrane  receptor complex  neutrophil degranulation  tertiary granule membrane  
Ontology : EGO-EBIgalanin receptor activity  plasma membrane  integral component of plasma membrane  adenylate cyclase-modulating G-protein coupled receptor signaling pathway  phospholipase C-activating G-protein coupled receptor signaling pathway  neuropeptide signaling pathway  biological_process  specific granule membrane  receptor complex  neutrophil degranulation  tertiary granule membrane  
NDEx NetworkGPR84
Atlas of Cancer Signalling NetworkGPR84
Wikipedia pathwaysGPR84
Orthology - Evolution
OrthoDB53831
GeneTree (enSembl)ENSG00000139572
Phylogenetic Trees/Animal Genes : TreeFamGPR84
HOVERGENQ9NQS5
HOGENOMQ9NQS5
Homologs : HomoloGeneGPR84
Homology/Alignments : Family Browser (UCSC)GPR84
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPR84 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPR84
dbVarGPR84
ClinVarGPR84
1000_GenomesGPR84 
Exome Variant ServerGPR84
ExAC (Exome Aggregation Consortium)GPR84 (select the gene name)
Genetic variants : HAPMAP53831
Genomic Variants (DGV)GPR84 [DGVbeta]
DECIPHERGPR84 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGPR84 
Mutations
ICGC Data PortalGPR84 
TCGA Data PortalGPR84 
Broad Tumor PortalGPR84
OASIS PortalGPR84 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPR84  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPR84
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPR84
DgiDB (Drug Gene Interaction Database)GPR84
DoCM (Curated mutations)GPR84 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPR84 (select a term)
intoGenGPR84
Cancer3DGPR84(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606383   
Orphanet
MedgenGPR84
Genetic Testing Registry GPR84
NextProtQ9NQS5 [Medical]
TSGene53831
GENETestsGPR84
Target ValidationGPR84
Huge Navigator GPR84 [HugePedia]
snp3D : Map Gene to Disease53831
BioCentury BCIQGPR84
ClinGenGPR84
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD53831
Chemical/Pharm GKB GenePA28928
Clinical trialGPR84
Miscellaneous
canSAR (ICR)GPR84 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR84
EVEXGPR84
GoPubMedGPR84
iHOPGPR84
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:35:53 CEST 2017

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