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GPR85 (G protein-coupled receptor 85)

Identity

Alias_symbol (synonym)SREB2
Other aliasSREB
HGNC (Hugo) GPR85
LocusID (NCBI) 54329
Atlas_Id 64010
Location 7q31.1  [Link to chromosome band 7q31]
Location_base_pair Starts at 113080413 and ends at 113087778 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPR85   4536
Cards
Entrez_Gene (NCBI)GPR85  54329  G protein-coupled receptor 85
AliasesSREB; SREB2
GeneCards (Weizmann)GPR85
Ensembl hg19 (Hinxton)ENSG00000164604 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164604 [Gene_View]  chr7:113080413-113087778 [Contig_View]  GPR85 [Vega]
ICGC DataPortalENSG00000164604
TCGA cBioPortalGPR85
AceView (NCBI)GPR85
Genatlas (Paris)GPR85
WikiGenes54329
SOURCE (Princeton)GPR85
Genetics Home Reference (NIH)GPR85
Genomic and cartography
GoldenPath hg38 (UCSC)GPR85  -     chr7:113080413-113087778 -  7q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPR85  -     7q31.1   [Description]    (hg19-Feb_2009)
EnsemblGPR85 - 7q31.1 [CytoView hg19]  GPR85 - 7q31.1 [CytoView hg38]
Mapping of homologs : NCBIGPR85 [Mapview hg19]  GPR85 [Mapview hg38]
OMIM605188   
Gene and transcription
Genbank (Entrez)AB040800 AF250237 AK297464 AK302769 AK309392
RefSeq transcript (Entrez)NM_001146265 NM_001146266 NM_001146267 NM_018970
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPR85
Cluster EST : UnigeneHs.152009 [ NCBI ]
CGAP (NCI)Hs.152009
Alternative Splicing GalleryENSG00000164604
Gene ExpressionGPR85 [ NCBI-GEO ]   GPR85 [ EBI - ARRAY_EXPRESS ]   GPR85 [ SEEK ]   GPR85 [ MEM ]
Gene Expression Viewer (FireBrowse)GPR85 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54329
GTEX Portal (Tissue expression)GPR85
Human Protein AtlasENSG00000164604-GPR85 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP60893   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP60893  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP60893
Splice isoforms : SwissVarP60893
PhosPhoSitePlusP60893
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)GPR85
DMDM Disease mutations54329
Blocks (Seattle)GPR85
SuperfamilyP60893
Human Protein Atlas [tissue]ENSG00000164604-GPR85 [tissue]
Peptide AtlasP60893
HPRD05543
IPIIPI00014802   IPI01018622   IPI00911017   IPI00908861   IPI00927326   
Protein Interaction databases
DIP (DOE-UCLA)P60893
IntAct (EBI)P60893
FunCoupENSG00000164604
BioGRIDGPR85
STRING (EMBL)GPR85
ZODIACGPR85
Ontologies - Pathways
QuickGOP60893
Ontology : AmiGOG-protein coupled receptor activity  protein binding  endoplasmic reticulum  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  
Ontology : EGO-EBIG-protein coupled receptor activity  protein binding  endoplasmic reticulum  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  
NDEx NetworkGPR85
Atlas of Cancer Signalling NetworkGPR85
Wikipedia pathwaysGPR85
Orthology - Evolution
OrthoDB54329
GeneTree (enSembl)ENSG00000164604
Phylogenetic Trees/Animal Genes : TreeFamGPR85
HOVERGENP60893
HOGENOMP60893
Homologs : HomoloGeneGPR85
Homology/Alignments : Family Browser (UCSC)GPR85
Gene fusions - Rearrangements
Tumor Fusion PortalGPR85
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPR85 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPR85
dbVarGPR85
ClinVarGPR85
1000_GenomesGPR85 
Exome Variant ServerGPR85
ExAC (Exome Aggregation Consortium)ENSG00000164604
GNOMAD BrowserENSG00000164604
Genetic variants : HAPMAP54329
Genomic Variants (DGV)GPR85 [DGVbeta]
DECIPHERGPR85 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGPR85 
Mutations
ICGC Data PortalGPR85 
TCGA Data PortalGPR85 
Broad Tumor PortalGPR85
OASIS PortalGPR85 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPR85  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPR85
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPR85
DgiDB (Drug Gene Interaction Database)GPR85
DoCM (Curated mutations)GPR85 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPR85 (select a term)
intoGenGPR85
Cancer3DGPR85(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605188   
Orphanet
DisGeNETGPR85
MedgenGPR85
Genetic Testing Registry GPR85
NextProtP60893 [Medical]
TSGene54329
GENETestsGPR85
Target ValidationGPR85
Huge Navigator GPR85 [HugePedia]
snp3D : Map Gene to Disease54329
BioCentury BCIQGPR85
ClinGenGPR85
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54329
Chemical/Pharm GKB GenePA28929
Clinical trialGPR85
Miscellaneous
canSAR (ICR)GPR85 (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR85
EVEXGPR85
GoPubMedGPR85
iHOPGPR85
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:16:10 CET 2017

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