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GPR89A (G protein-coupled receptor 89A)

Identity

Alias_symbol (synonym)UNQ192
Other aliasGPHR
GPR89
GPR89B
SH120
HGNC (Hugo) GPR89A
LocusID (NCBI) 653519
Atlas_Id 64012
Location 1q21.1  [Link to chromosome band 1q21]
Location_base_pair Starts at 145607960 and ends at 145670464 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GPR89A (1q21.1) / SCAF8 (6q25.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPR89A   31984
Cards
Entrez_Gene (NCBI)GPR89A  653519  G protein-coupled receptor 89A
AliasesGPHR; GPR89; GPR89B; SH120; 
UNQ192
GeneCards (Weizmann)GPR89A
Ensembl hg19 (Hinxton)ENSG00000117262 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000117262 [Gene_View]  chr1:145607960-145670464 [Contig_View]  GPR89A [Vega]
ICGC DataPortalENSG00000117262
TCGA cBioPortalGPR89A
AceView (NCBI)GPR89A
Genatlas (Paris)GPR89A
WikiGenes653519
SOURCE (Princeton)GPR89A
Genetics Home Reference (NIH)GPR89A
Genomic and cartography
GoldenPath hg38 (UCSC)GPR89A  -     chr1:145607960-145670464 +  1q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPR89A  -     1q21.1   [Description]    (hg19-Feb_2009)
EnsemblGPR89A - 1q21.1 [CytoView hg19]  GPR89A - 1q21.1 [CytoView hg38]
Mapping of homologs : NCBIGPR89A [Mapview hg19]  GPR89A [Mapview hg38]
OMIM612821   
Gene and transcription
Genbank (Entrez)AB097024 AB097025 AF132947 AK001354 AK021758
RefSeq transcript (Entrez)NM_001097612 NM_001097613
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPR89A
Cluster EST : UnigeneHs.559115 [ NCBI ]
CGAP (NCI)Hs.559115
Alternative Splicing GalleryENSG00000117262
Gene ExpressionGPR89A [ NCBI-GEO ]   GPR89A [ EBI - ARRAY_EXPRESS ]   GPR89A [ SEEK ]   GPR89A [ MEM ]
Gene Expression Viewer (FireBrowse)GPR89A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)653519
GTEX Portal (Tissue expression)GPR89A
Protein : pattern, domain, 3D structure
UniProt/SwissProtB7ZAQ6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtB7ZAQ6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProB7ZAQ6
Splice isoforms : SwissVarB7ZAQ6
PhosPhoSitePlusB7ZAQ6
Domains : Interpro (EBI)ABA_GPCR_dom    Golgi_pH-regulator_cons_dom    GPHR/GTG   
Domain families : Pfam (Sanger)ABA_GPCR (PF12430)    GPHR_N (PF12537)   
Domain families : Pfam (NCBI)pfam12430    pfam12537   
Conserved Domain (NCBI)GPR89A
DMDM Disease mutations653519
Blocks (Seattle)GPR89A
SuperfamilyB7ZAQ6
Human Protein AtlasENSG00000117262
Peptide AtlasB7ZAQ6
IPIIPI00654550   IPI00967342   IPI00910920   IPI00976860   IPI00981134   
Protein Interaction databases
DIP (DOE-UCLA)B7ZAQ6
IntAct (EBI)B7ZAQ6
FunCoupENSG00000117262
BioGRIDGPR89A
STRING (EMBL)GPR89A
ZODIACGPR89A
Ontologies - Pathways
QuickGOB7ZAQ6
Ontology : AmiGOsignal transducer activity  ion transport  signal transduction  voltage-gated anion channel activity  protein transport  integral component of membrane  Golgi-associated vesicle membrane  Golgi cisterna membrane  positive regulation of I-kappaB kinase/NF-kappaB signaling  intracellular pH reduction  regulation of anion transmembrane transport  
Ontology : EGO-EBIsignal transducer activity  ion transport  signal transduction  voltage-gated anion channel activity  protein transport  integral component of membrane  Golgi-associated vesicle membrane  Golgi cisterna membrane  positive regulation of I-kappaB kinase/NF-kappaB signaling  intracellular pH reduction  regulation of anion transmembrane transport  
NDEx NetworkGPR89A
Atlas of Cancer Signalling NetworkGPR89A
Wikipedia pathwaysGPR89A
Orthology - Evolution
OrthoDB653519
GeneTree (enSembl)ENSG00000117262
Phylogenetic Trees/Animal Genes : TreeFamGPR89A
HOVERGENB7ZAQ6
HOGENOMB7ZAQ6
Homologs : HomoloGeneGPR89A
Homology/Alignments : Family Browser (UCSC)GPR89A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPR89A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPR89A
dbVarGPR89A
ClinVarGPR89A
1000_GenomesGPR89A 
Exome Variant ServerGPR89A
ExAC (Exome Aggregation Consortium)GPR89A (select the gene name)
Genetic variants : HAPMAP653519
Genomic Variants (DGV)GPR89A [DGVbeta]
DECIPHERGPR89A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGPR89A 
Mutations
ICGC Data PortalGPR89A 
TCGA Data PortalGPR89A 
Broad Tumor PortalGPR89A
OASIS PortalGPR89A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPR89A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPR89A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPR89A
DgiDB (Drug Gene Interaction Database)GPR89A
DoCM (Curated mutations)GPR89A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPR89A (select a term)
intoGenGPR89A
Cancer3DGPR89A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612821   
Orphanet
MedgenGPR89A
Genetic Testing Registry GPR89A
NextProtB7ZAQ6 [Medical]
TSGene653519
GENETestsGPR89A
Target ValidationGPR89A
Huge Navigator GPR89A [HugePedia]
snp3D : Map Gene to Disease653519
BioCentury BCIQGPR89A
ClinGenGPR89A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD653519
Chemical/Pharm GKB GenePA134986137
Clinical trialGPR89A
Miscellaneous
canSAR (ICR)GPR89A (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPR89A
EVEXGPR89A
GoPubMedGPR89A
iHOPGPR89A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:09:50 CEST 2017

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