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GPRC5C (G protein-coupled receptor class C group 5 member C)

Identity

Alias_namesG protein-coupled receptor, family C, group 5, member C
G protein-coupled receptor, class C, group 5, member C
Alias_symbol (synonym)RAIG-3
Other aliasRAIG3
HGNC (Hugo) GPRC5C
LocusID (NCBI) 55890
Atlas_Id 64018
Location 17q25.1  [Link to chromosome band 17q25]
Location_base_pair Starts at 74433697 and ends at 74447429 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ADAM12 (10q26.2) / GPRC5C (17q25.1)GPRC5C (17q25.1) / CLDN4 (7q11.23)GPRC5C (17q25.1) / GPRC5C (17q25.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPRC5C   13309
Cards
Entrez_Gene (NCBI)GPRC5C  55890  G protein-coupled receptor class C group 5 member C
AliasesRAIG-3; RAIG3
GeneCards (Weizmann)GPRC5C
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:74433697-74447429 [Contig_View]  GPRC5C [Vega]
TCGA cBioPortalGPRC5C
AceView (NCBI)GPRC5C
Genatlas (Paris)GPRC5C
WikiGenes55890
SOURCE (Princeton)GPRC5C
Genetics Home Reference (NIH)GPRC5C
Genomic and cartography
GoldenPath hg38 (UCSC)GPRC5C  -     chr17:74433697-74447429 +  17q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPRC5C  -     17q25.1   [Description]    (hg19-Feb_2009)
EnsemblGPRC5C - 17q25.1 [CytoView hg19]  GPRC5C - 17q25.1 [CytoView hg38]
Mapping of homologs : NCBIGPRC5C [Mapview hg19]  GPRC5C [Mapview hg38]
OMIM605949   
Gene and transcription
Genbank (Entrez)AB451470 AF207989 AJ276102 AK000249 AK075397
RefSeq transcript (Entrez)NM_018653 NM_022036
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPRC5C
Cluster EST : UnigeneHs.446438 [ NCBI ]
CGAP (NCI)Hs.446438
Gene ExpressionGPRC5C [ NCBI-GEO ]   GPRC5C [ EBI - ARRAY_EXPRESS ]   GPRC5C [ SEEK ]   GPRC5C [ MEM ]
Gene Expression Viewer (FireBrowse)GPRC5C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55890
GTEX Portal (Tissue expression)GPRC5C
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NQ84   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NQ84  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NQ84
Splice isoforms : SwissVarQ9NQ84
PhosPhoSitePlusQ9NQ84
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F3_4 (PS50259)   
Domains : Interpro (EBI)GPCR_3_C   
Domain families : Pfam (Sanger)7tm_3 (PF00003)   
Domain families : Pfam (NCBI)pfam00003   
Conserved Domain (NCBI)GPRC5C
DMDM Disease mutations55890
Blocks (Seattle)GPRC5C
SuperfamilyQ9NQ84
Peptide AtlasQ9NQ84
HPRD16178
IPIIPI00789902   IPI00386690   IPI00004901   IPI00396108   IPI00790490   
Protein Interaction databases
DIP (DOE-UCLA)Q9NQ84
IntAct (EBI)Q9NQ84
BioGRIDGPRC5C
STRING (EMBL)GPRC5C
ZODIACGPRC5C
Ontologies - Pathways
QuickGOQ9NQ84
Ontology : AmiGOG-protein coupled receptor activity  integral component of plasma membrane  G-protein coupled receptor signaling pathway  cytoplasmic vesicle membrane  vesicle  receptor complex  extracellular exosome  
Ontology : EGO-EBIG-protein coupled receptor activity  integral component of plasma membrane  G-protein coupled receptor signaling pathway  cytoplasmic vesicle membrane  vesicle  receptor complex  extracellular exosome  
NDEx NetworkGPRC5C
Atlas of Cancer Signalling NetworkGPRC5C
Wikipedia pathwaysGPRC5C
Orthology - Evolution
OrthoDB55890
Phylogenetic Trees/Animal Genes : TreeFamGPRC5C
HOVERGENQ9NQ84
HOGENOMQ9NQ84
Homologs : HomoloGeneGPRC5C
Homology/Alignments : Family Browser (UCSC)GPRC5C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPRC5C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPRC5C
dbVarGPRC5C
ClinVarGPRC5C
1000_GenomesGPRC5C 
Exome Variant ServerGPRC5C
ExAC (Exome Aggregation Consortium)GPRC5C (select the gene name)
Genetic variants : HAPMAP55890
Genomic Variants (DGV)GPRC5C [DGVbeta]
DECIPHERGPRC5C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGPRC5C 
Mutations
ICGC Data PortalGPRC5C 
TCGA Data PortalGPRC5C 
Broad Tumor PortalGPRC5C
OASIS PortalGPRC5C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPRC5C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPRC5C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPRC5C
DgiDB (Drug Gene Interaction Database)GPRC5C
DoCM (Curated mutations)GPRC5C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPRC5C (select a term)
intoGenGPRC5C
Cancer3DGPRC5C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605949   
Orphanet
MedgenGPRC5C
Genetic Testing Registry GPRC5C
NextProtQ9NQ84 [Medical]
TSGene55890
GENETestsGPRC5C
Target ValidationGPRC5C
Huge Navigator GPRC5C [HugePedia]
snp3D : Map Gene to Disease55890
BioCentury BCIQGPRC5C
ClinGenGPRC5C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55890
Chemical/Pharm GKB GenePA28939
Clinical trialGPRC5C
Miscellaneous
canSAR (ICR)GPRC5C (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPRC5C
EVEXGPRC5C
GoPubMedGPRC5C
iHOPGPRC5C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:51:21 CEST 2017

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