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GPRIN1 (G protein regulated inducer of neurite outgrowth 1)

Identity

Alias_symbol (synonym)GRIN1
KIAA1893
Other alias
HGNC (Hugo) GPRIN1
LocusID (NCBI) 114787
Atlas_Id 64019
Location 5q35.2  [Link to chromosome band 5q35]
Location_base_pair Starts at 176595802 and ends at 176610130 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPRIN1   24835
Cards
Entrez_Gene (NCBI)GPRIN1  114787  G protein regulated inducer of neurite outgrowth 1
AliasesGRIN1
GeneCards (Weizmann)GPRIN1
Ensembl hg19 (Hinxton)ENSG00000169258 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000169258 [Gene_View]  chr5:176595802-176610130 [Contig_View]  GPRIN1 [Vega]
ICGC DataPortalENSG00000169258
TCGA cBioPortalGPRIN1
AceView (NCBI)GPRIN1
Genatlas (Paris)GPRIN1
WikiGenes114787
SOURCE (Princeton)GPRIN1
Genetics Home Reference (NIH)GPRIN1
Genomic and cartography
GoldenPath hg38 (UCSC)GPRIN1  -     chr5:176595802-176610130 -  5q35.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPRIN1  -     5q35.2   [Description]    (hg19-Feb_2009)
EnsemblGPRIN1 - 5q35.2 [CytoView hg19]  GPRIN1 - 5q35.2 [CytoView hg38]
Mapping of homologs : NCBIGPRIN1 [Mapview hg19]  GPRIN1 [Mapview hg38]
OMIM611239   
Gene and transcription
Genbank (Entrez)AB067480 AL834165 BC052950
RefSeq transcript (Entrez)NM_052899
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPRIN1
Cluster EST : UnigeneHs.150549 [ NCBI ]
CGAP (NCI)Hs.150549
Alternative Splicing GalleryENSG00000169258
Gene ExpressionGPRIN1 [ NCBI-GEO ]   GPRIN1 [ EBI - ARRAY_EXPRESS ]   GPRIN1 [ SEEK ]   GPRIN1 [ MEM ]
Gene Expression Viewer (FireBrowse)GPRIN1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)114787
GTEX Portal (Tissue expression)GPRIN1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z2K8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z2K8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z2K8
Splice isoforms : SwissVarQ7Z2K8
PhosPhoSitePlusQ7Z2K8
Domains : Interpro (EBI)GRIN_C   
Domain families : Pfam (Sanger)GRIN_C (PF15235)   
Domain families : Pfam (NCBI)pfam15235   
Conserved Domain (NCBI)GPRIN1
DMDM Disease mutations114787
Blocks (Seattle)GPRIN1
SuperfamilyQ7Z2K8
Human Protein AtlasENSG00000169258
Peptide AtlasQ7Z2K8
HPRD11169
IPIIPI00332155   IPI00744232   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z2K8
IntAct (EBI)Q7Z2K8
FunCoupENSG00000169258
BioGRIDGPRIN1
STRING (EMBL)GPRIN1
ZODIACGPRIN1
Ontologies - Pathways
QuickGOQ7Z2K8
Ontology : AmiGOplasma membrane  growth cone  neuron projection development  phosphoprotein binding  
Ontology : EGO-EBIplasma membrane  growth cone  neuron projection development  phosphoprotein binding  
NDEx NetworkGPRIN1
Atlas of Cancer Signalling NetworkGPRIN1
Wikipedia pathwaysGPRIN1
Orthology - Evolution
OrthoDB114787
GeneTree (enSembl)ENSG00000169258
Phylogenetic Trees/Animal Genes : TreeFamGPRIN1
HOVERGENQ7Z2K8
HOGENOMQ7Z2K8
Homologs : HomoloGeneGPRIN1
Homology/Alignments : Family Browser (UCSC)GPRIN1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPRIN1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPRIN1
dbVarGPRIN1
ClinVarGPRIN1
1000_GenomesGPRIN1 
Exome Variant ServerGPRIN1
ExAC (Exome Aggregation Consortium)GPRIN1 (select the gene name)
Genetic variants : HAPMAP114787
Genomic Variants (DGV)GPRIN1 [DGVbeta]
DECIPHERGPRIN1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGPRIN1 
Mutations
ICGC Data PortalGPRIN1 
TCGA Data PortalGPRIN1 
Broad Tumor PortalGPRIN1
OASIS PortalGPRIN1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPRIN1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPRIN1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPRIN1
DgiDB (Drug Gene Interaction Database)GPRIN1
DoCM (Curated mutations)GPRIN1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPRIN1 (select a term)
intoGenGPRIN1
Cancer3DGPRIN1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611239   
Orphanet
MedgenGPRIN1
Genetic Testing Registry GPRIN1
NextProtQ7Z2K8 [Medical]
TSGene114787
GENETestsGPRIN1
Target ValidationGPRIN1
Huge Navigator GPRIN1 [HugePedia]
snp3D : Map Gene to Disease114787
BioCentury BCIQGPRIN1
ClinGenGPRIN1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD114787
Chemical/Pharm GKB GenePA162390183
Clinical trialGPRIN1
Miscellaneous
canSAR (ICR)GPRIN1 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPRIN1
EVEXGPRIN1
GoPubMedGPRIN1
iHOPGPRIN1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:51:22 CEST 2017

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