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GPRIN2 (G protein regulated inducer of neurite outgrowth 2)

Identity

Alias_namesKIAA0514
KIAA0514
Alias_symbol (synonym)MGC15171
Other aliasGRIN2
HGNC (Hugo) GPRIN2
LocusID (NCBI) 9721
Atlas_Id 64020
Location 10q11.22  [Link to chromosome band 10q11]
Location_base_pair Starts at 46549049 and ends at 46556071 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GPRIN2   23730
Cards
Entrez_Gene (NCBI)GPRIN2  9721  G protein regulated inducer of neurite outgrowth 2
AliasesGRIN2; KIAA0514
GeneCards (Weizmann)GPRIN2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:46549049-46556071 [Contig_View]  GPRIN2 [Vega]
TCGA cBioPortalGPRIN2
AceView (NCBI)GPRIN2
Genatlas (Paris)GPRIN2
WikiGenes9721
SOURCE (Princeton)GPRIN2
Genetics Home Reference (NIH)GPRIN2
Genomic and cartography
GoldenPath hg38 (UCSC)GPRIN2  -     chr10:46549049-46556071 -  10q11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GPRIN2  -     10q11.22   [Description]    (hg19-Feb_2009)
EnsemblGPRIN2 - 10q11.22 [CytoView hg19]  GPRIN2 - 10q11.22 [CytoView hg38]
Mapping of homologs : NCBIGPRIN2 [Mapview hg19]  GPRIN2 [Mapview hg38]
OMIM611240   
Gene and transcription
Genbank (Entrez)AB011086 BC011672
RefSeq transcript (Entrez)NM_014696
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GPRIN2
Cluster EST : UnigeneHs.523375 [ NCBI ]
CGAP (NCI)Hs.523375
Gene ExpressionGPRIN2 [ NCBI-GEO ]   GPRIN2 [ EBI - ARRAY_EXPRESS ]   GPRIN2 [ SEEK ]   GPRIN2 [ MEM ]
Gene Expression Viewer (FireBrowse)GPRIN2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9721
GTEX Portal (Tissue expression)GPRIN2
Protein : pattern, domain, 3D structure
UniProt/SwissProtO60269   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO60269  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO60269
Splice isoforms : SwissVarO60269
PhosPhoSitePlusO60269
Domains : Interpro (EBI)GPRIN2-like/GPRIN3    GRIN_C   
Domain families : Pfam (Sanger)GRIN_C (PF15235)   
Domain families : Pfam (NCBI)pfam15235   
Conserved Domain (NCBI)GPRIN2
DMDM Disease mutations9721
Blocks (Seattle)GPRIN2
SuperfamilyO60269
Peptide AtlasO60269
HPRD13804
IPIIPI00028518   
Protein Interaction databases
DIP (DOE-UCLA)O60269
IntAct (EBI)O60269
BioGRIDGPRIN2
STRING (EMBL)GPRIN2
ZODIACGPRIN2
Ontologies - Pathways
QuickGOO60269
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkGPRIN2
Atlas of Cancer Signalling NetworkGPRIN2
Wikipedia pathwaysGPRIN2
Orthology - Evolution
OrthoDB9721
Phylogenetic Trees/Animal Genes : TreeFamGPRIN2
HOVERGENO60269
HOGENOMO60269
Homologs : HomoloGeneGPRIN2
Homology/Alignments : Family Browser (UCSC)GPRIN2
Gene fusions - Rearrangements
Tumor Fusion PortalGPRIN2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGPRIN2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GPRIN2
dbVarGPRIN2
ClinVarGPRIN2
1000_GenomesGPRIN2 
Exome Variant ServerGPRIN2
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP9721
Genomic Variants (DGV)GPRIN2 [DGVbeta]
DECIPHERGPRIN2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGPRIN2 
Mutations
ICGC Data PortalGPRIN2 
TCGA Data PortalGPRIN2 
Broad Tumor PortalGPRIN2
OASIS PortalGPRIN2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGPRIN2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGPRIN2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GPRIN2
DgiDB (Drug Gene Interaction Database)GPRIN2
DoCM (Curated mutations)GPRIN2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GPRIN2 (select a term)
intoGenGPRIN2
Cancer3DGPRIN2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611240   
Orphanet
DisGeNETGPRIN2
MedgenGPRIN2
Genetic Testing Registry GPRIN2
NextProtO60269 [Medical]
TSGene9721
GENETestsGPRIN2
Target ValidationGPRIN2
Huge Navigator GPRIN2 [HugePedia]
snp3D : Map Gene to Disease9721
BioCentury BCIQGPRIN2
ClinGenGPRIN2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9721
Chemical/Pharm GKB GenePA162390192
Clinical trialGPRIN2
Miscellaneous
canSAR (ICR)GPRIN2 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGPRIN2
EVEXGPRIN2
GoPubMedGPRIN2
iHOPGPRIN2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:21:41 CET 2017

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