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GPX7 (glutathione peroxidase 7)

Identity

Other namesCL683
GPX6
GPx-7
GSHPx-7
NPGPx
HGNC (Hugo) GPX7
LocusID (NCBI) 2882
Location 1p32.3
Location_base_pair Starts at 53068043 and ends at 53074723 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)GPX7   4559
Entrez_Gene (NCBI)GPX7  2882  glutathione peroxidase 7
Cards
GeneCards (Weizmann)GPX7
Ensembl (Hinxton)ENSG00000116157 [Gene_View]  chr1:53068043-53074723 [Contig_View]  GPX7 [Vega]
AceView (NCBI)GPX7
Genatlas (Paris)GPX7
SOURCE (Stanford)NM_015696
Genomic and cartography
GoldenPath (UCSC)GPX7  -  1p32.3   chr1:53068043-53074723 +  1p32.3   [Description]    (hg19-Feb_2009)
EnsemblGPX7 - 1p32.3 [CytoView]
Mapping of homologs : NCBIGPX7 [Mapview]
Gene and transcription
Genbank (Entrez)AF091092 AF320068 AK027683 AY358402 BC032788
RefSeq transcript (SRS)NM_015696
RefSeq transcript (Entrez)NM_015696
RefSeq genomic (SRS)AC_000133 NC_000001 NC_018912 NT_032977 NW_001838579 NW_004077990
RefSeq genomic (Entrez)AC_000133 NC_000001 NC_018912 NT_032977 NW_001838579 NW_004077990
Consensus coding sequences : CCDS (NCBI)GPX7
Cluster EST : UnigeneHs.43728 [ SRS ] Hs.43728 [ NCBI ]
CGAP (NCI)Hs.43728
Alternative Splicing : Fast-db (Paris)GSHG0000513
Alternative Splicing GalleryENSG00000116157
Gene ExpressionGPX7 [ NCBI-GEO ]   GPX7 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96SL4 (SRS) Q96SL4 (Uniprot)
NextProtQ96SL4
With graphics : InterProQ96SL4
Splice isoforms : SwissVarQ96SL4(Swissvar)
Domaine pattern : Prosite (SRS)GLUTATHIONE_PEROXID_1 (PS00460)    GLUTATHIONE_PEROXID_2 (PS00763)    GLUTATHIONE_PEROXID_3 (PS51355)   
Domaine pattern : Prosite (Expaxy)GLUTATHIONE_PEROXID_1 (PS00460)    GLUTATHIONE_PEROXID_2 (PS00763)    GLUTATHIONE_PEROXID_3 (PS51355)   
Domains : Interpro (SRS)Glut_perox_Gpx7    Glutathione_peroxidase    Thioredoxin-like_fold   
Domains : Interpro (EBI)Glut_perox_Gpx7    Glutathione_peroxidase    Thioredoxin-like_fold   
Related proteins : CluSTrQ96SL4
Domain families : Pfam (SRS)GSHPx (PF00255)   
Domain families : Pfam (Sanger)GSHPx (PF00255)   
Domain families : Pfam (NCBI)pfam00255   
DMDM2882
Blocks (Seattle)Q96SL4
PDB (SRS)2P31   
PDB (PDBSum)2P31   
PDB (IMB)2P31   
PDB (RSDB)2P31   
Human Protein AtlasENSG00000116157
HPRD13606
IPIIPI00045798   
Protein Interaction databases
DIP (DOE-UCLA)Q96SL4
IntAct (EBI)Q96SL4
FunCoupENSG00000116157
REACTOMEGPX7
Protein Interaction Database2882
BioGRIDGPX7
InParanoidQ96SL4
Interologous Interaction database Q96SL4
IntegromeDBGPX7
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)GPX7
SNP (GeneSNP Utah)GPX7
SNP : HGBaseGPX7
Genetic variants : HAPMAPGPX7
Somatic Mutations in Cancer : COSMICGPX7 
CONAN: Copy Number AnalysisGPX7 
Mutations and Diseases : HGMDGPX7
OMIM
GENETests
Disease Genetic AssociationGPX7
Huge Navigator GPX7 [HugePedia]  GPX7 [HugeCancerGEM]
Genomic VariantsGPX7  GPX7 [DGVbeta]
snp3D : Map Gene to Disease2882
General knowledge
Homologs : HomoloGeneGPX7
Homology/Alignments : Family Browser (UCSC)GPX7
Phylogenetic Trees/Animal Genes : TreeFamGPX7
Catalytic activity : Enzyme1.11.1.9 [ Enzyme-Expasy ]   1.11.1.9 [ Enzyme-SRS ]   1.11.1.9 [ IntEnz-EBI ]   1.11.1.9 [ BRENDA ]   1.11.1.9 [ KEGG ]   
Chemical/Protein Interactions : CTD2882
Chemical/Pharm GKB GenePA28955
Clinical trialGPX7
Cancer Resource (Charite)ENSG00000116157
Ontology : AmiGOglutathione peroxidase activity  extracellular region  response to oxidative stress  
Ontology : EGO-EBIglutathione peroxidase activity  extracellular region  response to oxidative stress  
Pathways : KEGGArachidonic acid metabolismGlutathione metabolism
Other databases
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
PubGeneGPX7
iHOPGPX7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:49:12 CEST 2013
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