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GRID2IP (Grid2 interacting protein)

Identity

Alias_namesglutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1
glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein
Other aliasDELPHILIN
HGNC (Hugo) GRID2IP
LocusID (NCBI) 392862
Atlas_Id 64037
Location 7p22.1  [Link to chromosome band 7p22]
Location_base_pair Starts at 6496778 and ends at 6551436 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
LAPTM5 (1p35.2) / GRID2IP (7p22.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GRID2IP   18464
Cards
Entrez_Gene (NCBI)GRID2IP  392862  Grid2 interacting protein
AliasesDELPHILIN
GeneCards (Weizmann)GRID2IP
Ensembl hg19 (Hinxton)ENSG00000215045 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000215045 [Gene_View]  chr7:6496778-6551436 [Contig_View]  GRID2IP [Vega]
ICGC DataPortalENSG00000215045
TCGA cBioPortalGRID2IP
AceView (NCBI)GRID2IP
Genatlas (Paris)GRID2IP
WikiGenes392862
SOURCE (Princeton)GRID2IP
Genetics Home Reference (NIH)GRID2IP
Genomic and cartography
GoldenPath hg38 (UCSC)GRID2IP  -     chr7:6496778-6551436 -  7p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GRID2IP  -     7p22.1   [Description]    (hg19-Feb_2009)
EnsemblGRID2IP - 7p22.1 [CytoView hg19]  GRID2IP - 7p22.1 [CytoView hg38]
Mapping of homologs : NCBIGRID2IP [Mapview hg19]  GRID2IP [Mapview hg38]
OMIM610639   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001145118
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GRID2IP
Cluster EST : UnigeneHs.512174 [ NCBI ]
CGAP (NCI)Hs.512174
Alternative Splicing GalleryENSG00000215045
Gene ExpressionGRID2IP [ NCBI-GEO ]   GRID2IP [ EBI - ARRAY_EXPRESS ]   GRID2IP [ SEEK ]   GRID2IP [ MEM ]
Gene Expression Viewer (FireBrowse)GRID2IP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)392862
GTEX Portal (Tissue expression)GRID2IP
Protein : pattern, domain, 3D structure
UniProt/SwissProtA4D2P6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA4D2P6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA4D2P6
Splice isoforms : SwissVarA4D2P6
PhosPhoSitePlusA4D2P6
Domaine pattern : Prosite (Expaxy)FH2 (PS51444)    PDZ (PS50106)   
Domains : Interpro (EBI)FH2_Formin    PDZ   
Domain families : Pfam (Sanger)FH2 (PF02181)    PDZ (PF00595)   
Domain families : Pfam (NCBI)pfam02181    pfam00595   
Domain families : Smart (EMBL)FH2 (SM00498)  PDZ (SM00228)  
Conserved Domain (NCBI)GRID2IP
DMDM Disease mutations392862
Blocks (Seattle)GRID2IP
SuperfamilyA4D2P6
Human Protein AtlasENSG00000215045
Peptide AtlasA4D2P6
IPIIPI00890736   IPI00925971   IPI00926187   
Protein Interaction databases
DIP (DOE-UCLA)A4D2P6
IntAct (EBI)A4D2P6
FunCoupENSG00000215045
BioGRIDGRID2IP
STRING (EMBL)GRID2IP
ZODIACGRID2IP
Ontologies - Pathways
QuickGOA4D2P6
Ontology : AmiGOcell junction  dendritic spine  postsynaptic membrane  long term synaptic depression  
Ontology : EGO-EBIcell junction  dendritic spine  postsynaptic membrane  long term synaptic depression  
NDEx NetworkGRID2IP
Atlas of Cancer Signalling NetworkGRID2IP
Wikipedia pathwaysGRID2IP
Orthology - Evolution
OrthoDB392862
GeneTree (enSembl)ENSG00000215045
Phylogenetic Trees/Animal Genes : TreeFamGRID2IP
HOVERGENA4D2P6
HOGENOMA4D2P6
Homologs : HomoloGeneGRID2IP
Homology/Alignments : Family Browser (UCSC)GRID2IP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGRID2IP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GRID2IP
dbVarGRID2IP
ClinVarGRID2IP
1000_GenomesGRID2IP 
Exome Variant ServerGRID2IP
ExAC (Exome Aggregation Consortium)GRID2IP (select the gene name)
Genetic variants : HAPMAP392862
Genomic Variants (DGV)GRID2IP [DGVbeta]
DECIPHERGRID2IP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGRID2IP 
Mutations
ICGC Data PortalGRID2IP 
TCGA Data PortalGRID2IP 
Broad Tumor PortalGRID2IP
OASIS PortalGRID2IP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGRID2IP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGRID2IP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GRID2IP
DgiDB (Drug Gene Interaction Database)GRID2IP
DoCM (Curated mutations)GRID2IP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GRID2IP (select a term)
intoGenGRID2IP
Cancer3DGRID2IP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610639   
Orphanet
MedgenGRID2IP
Genetic Testing Registry GRID2IP
NextProtA4D2P6 [Medical]
TSGene392862
GENETestsGRID2IP
Target ValidationGRID2IP
Huge Navigator GRID2IP [HugePedia]
snp3D : Map Gene to Disease392862
BioCentury BCIQGRID2IP
ClinGenGRID2IP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD392862
Chemical/Pharm GKB GenePA134951825
Clinical trialGRID2IP
Miscellaneous
canSAR (ICR)GRID2IP (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGRID2IP
EVEXGRID2IP
GoPubMedGRID2IP
iHOPGRID2IP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:09:54 CEST 2017

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