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GRIPAP1 (GRIP1 associated protein 1)

Identity

Alias_symbol (synonym)GRASP-1
GRASP1
KIAA1167
MPMGp800B12492Q3
DKFZp434P0630
Other alias
HGNC (Hugo) GRIPAP1
LocusID (NCBI) 56850
Atlas_Id 43300
Location Xp11.23  [Link to chromosome band Xp11]
Location_base_pair Starts at 48973720 and ends at 49002264 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GRIPAP1 (Xp11.23) / GRIPAP1 (Xp11.23)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GRIPAP1   18706
Cards
Entrez_Gene (NCBI)GRIPAP1  56850  GRIP1 associated protein 1
AliasesGRASP-1
GeneCards (Weizmann)GRIPAP1
Ensembl hg19 (Hinxton)ENSG00000068400 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000068400 [Gene_View]  chrX:48973720-49002264 [Contig_View]  GRIPAP1 [Vega]
ICGC DataPortalENSG00000068400
TCGA cBioPortalGRIPAP1
AceView (NCBI)GRIPAP1
Genatlas (Paris)GRIPAP1
WikiGenes56850
SOURCE (Princeton)GRIPAP1
Genetics Home Reference (NIH)GRIPAP1
Genomic and cartography
GoldenPath hg38 (UCSC)GRIPAP1  -     chrX:48973720-49002264 -  Xp11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GRIPAP1  -     Xp11.23   [Description]    (hg19-Feb_2009)
EnsemblGRIPAP1 - Xp11.23 [CytoView hg19]  GRIPAP1 - Xp11.23 [CytoView hg38]
Mapping of homologs : NCBIGRIPAP1 [Mapview hg19]  GRIPAP1 [Mapview hg38]
OMIM300408   
Gene and transcription
Genbank (Entrez)AA679202 AB032993 AJ297364 AK292158 AL136847
RefSeq transcript (Entrez)NM_020137 NM_207672
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GRIPAP1
Cluster EST : UnigeneHs.109929 [ NCBI ]
CGAP (NCI)Hs.109929
Alternative Splicing GalleryENSG00000068400
Gene ExpressionGRIPAP1 [ NCBI-GEO ]   GRIPAP1 [ EBI - ARRAY_EXPRESS ]   GRIPAP1 [ SEEK ]   GRIPAP1 [ MEM ]
Gene Expression Viewer (FireBrowse)GRIPAP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56850
GTEX Portal (Tissue expression)GRIPAP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ4V328   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ4V328  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ4V328
Splice isoforms : SwissVarQ4V328
PhosPhoSitePlusQ4V328
Domains : Interpro (EBI)GRIPAP1   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GRIPAP1
DMDM Disease mutations56850
Blocks (Seattle)GRIPAP1
SuperfamilyQ4V328
Human Protein AtlasENSG00000068400
Peptide AtlasQ4V328
HPRD02325
IPIIPI00873904   IPI00414215   IPI00423384   IPI00607628   IPI00644786   
Protein Interaction databases
DIP (DOE-UCLA)Q4V328
IntAct (EBI)Q4V328
FunCoupENSG00000068400
BioGRIDGRIPAP1
STRING (EMBL)GRIPAP1
ZODIACGRIPAP1
Ontologies - Pathways
QuickGOQ4V328
Ontology : AmiGOmolecular_function  protein binding  nucleoplasm  early endosome  cytosol  biological_process  intracellular membrane-bounded organelle  blood microparticle  postsynaptic recycling endosome  neurotransmitter receptor transport, endosome to postsynaptic membrane  regulation of modification of synaptic structure  
Ontology : EGO-EBImolecular_function  protein binding  nucleoplasm  early endosome  cytosol  biological_process  intracellular membrane-bounded organelle  blood microparticle  postsynaptic recycling endosome  neurotransmitter receptor transport, endosome to postsynaptic membrane  regulation of modification of synaptic structure  
NDEx NetworkGRIPAP1
Atlas of Cancer Signalling NetworkGRIPAP1
Wikipedia pathwaysGRIPAP1
Orthology - Evolution
OrthoDB56850
GeneTree (enSembl)ENSG00000068400
Phylogenetic Trees/Animal Genes : TreeFamGRIPAP1
HOVERGENQ4V328
HOGENOMQ4V328
Homologs : HomoloGeneGRIPAP1
Homology/Alignments : Family Browser (UCSC)GRIPAP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGRIPAP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GRIPAP1
dbVarGRIPAP1
ClinVarGRIPAP1
1000_GenomesGRIPAP1 
Exome Variant ServerGRIPAP1
ExAC (Exome Aggregation Consortium)GRIPAP1 (select the gene name)
Genetic variants : HAPMAP56850
Genomic Variants (DGV)GRIPAP1 [DGVbeta]
DECIPHERGRIPAP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGRIPAP1 
Mutations
ICGC Data PortalGRIPAP1 
TCGA Data PortalGRIPAP1 
Broad Tumor PortalGRIPAP1
OASIS PortalGRIPAP1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDGRIPAP1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch GRIPAP1
DgiDB (Drug Gene Interaction Database)GRIPAP1
DoCM (Curated mutations)GRIPAP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GRIPAP1 (select a term)
intoGenGRIPAP1
Cancer3DGRIPAP1(select the gene name)
ImPact f mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300408   
Orphanet
MedgenGRIPAP1
Genetic Testing Registry GRIPAP1
NextProtQ4V328 [Medical]
TSGene56850
GENETestsGRIPAP1
Target ValidationGRIPAP1
Huge Navigator GRIPAP1 [HugePedia]
snp3D : Map Gene to Disease56850
BioCentury BCIQGRIPAP1
ClinGenGRIPAP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56850
Chemical/Pharm GKB GenePA38650
Clinical trialGRIPAP1
Miscellaneous
canSAR (ICR)GRIPAP1 (select the gene name)
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGRIPAP1
EVEXGRIPAP1
GoPubMedGRIPAP1
iHOPGRIPAP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:10:38 CEST 2017

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