Atlas of Genetics and Cytogenetics in Oncology and Haematology


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GRM5-AS1 (GRM5 antisense RNA 1)

Identity

Alias_namesGRM5 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) GRM5-AS1
LocusID (NCBI) 100873989
Atlas_Id 64051
Location 11q14.2  [Link to chromosome band 11q14]
Location_base_pair Starts at 88504576 and ends at 88524054 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GRM5-AS1   40265
Cards
Entrez_Gene (NCBI)GRM5-AS1  100873989  GRM5 antisense RNA 1
Aliases
GeneCards (Weizmann)GRM5-AS1
Ensembl hg19 (Hinxton)ENSG00000255082 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255082 [Gene_View]  chr11:88504576-88524054 [Contig_View]  GRM5-AS1 [Vega]
ICGC DataPortalENSG00000255082
TCGA cBioPortalGRM5-AS1
AceView (NCBI)GRM5-AS1
Genatlas (Paris)GRM5-AS1
WikiGenes100873989
SOURCE (Princeton)GRM5-AS1
Genetics Home Reference (NIH)GRM5-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)GRM5-AS1  -     chr11:88504576-88524054 +  11q14.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GRM5-AS1  -     11q14.2   [Description]    (hg19-Feb_2009)
EnsemblGRM5-AS1 - 11q14.2 [CytoView hg19]  GRM5-AS1 - 11q14.2 [CytoView hg38]
Mapping of homologs : NCBIGRM5-AS1 [Mapview hg19]  GRM5-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GRM5-AS1
Cluster EST : UnigeneHs.616625 [ NCBI ]
CGAP (NCI)Hs.616625
Alternative Splicing GalleryENSG00000255082
Gene ExpressionGRM5-AS1 [ NCBI-GEO ]   GRM5-AS1 [ EBI - ARRAY_EXPRESS ]   GRM5-AS1 [ SEEK ]   GRM5-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)GRM5-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100873989
GTEX Portal (Tissue expression)GRM5-AS1
Human Protein AtlasENSG00000255082-GRM5-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GRM5-AS1
DMDM Disease mutations100873989
Blocks (Seattle)GRM5-AS1
Human Protein Atlas [tissue]ENSG00000255082-GRM5-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000255082
BioGRIDGRM5-AS1
STRING (EMBL)GRM5-AS1
ZODIACGRM5-AS1
Ontologies - Pathways
Huge Navigator GRM5-AS1 [HugePedia]
snp3D : Map Gene to Disease100873989
BioCentury BCIQGRM5-AS1
ClinGenGRM5-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100873989
Clinical trialGRM5-AS1
Miscellaneous
canSAR (ICR)GRM5-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineGRM5-AS1
EVEXGRM5-AS1
GoPubMedGRM5-AS1
iHOPGRM5-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:49:46 CET 2017

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