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Taking over the Atlas
Dear Colleagues,
The Atlas, once more, is in great danger, and I will have to proceed to a collective economic lay-off of all the team involved in the Atlas before the begining of April 2015 (a foundation having suddenly withdrawn its commitment to support the Atlas). I ask you herein if any Scientific Society (a Society of Cytogenetics, of Clinical Genetics, of Hematology, or a Cancer Society, or any other...), any University and/or Hospital, any Charity, or any database would be interested in taking over the Atlas, in whole or in part. If taking charge of the whole lot is too big, a consortium of various actors could be the solution (I am myself trying to find partners). Could you please spread the information, contact the relevant authorities, and find partners.
Survival of the Atlas will be critically dependant upon your ability to find solutions (and urgently!).
Kind regards.
Jean-Loup Huret
Donations are also welcome

Donate (in Euros)

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GRP (gastrin-releasing peptide)

Identity

Other namesBN
GRP-10
preproGRP
proGRP
HGNC (Hugo) GRP
LocusID (NCBI) 2922
Location 18q21.32
Location_base_pair Starts at 56887400 and ends at 56898002 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)GRP   4605
Cards
Entrez_Gene (NCBI)GRP  2922  gastrin-releasing peptide
GeneCards (Weizmann)GRP
Ensembl hg19 (Hinxton)ENSG00000134443 [Gene_View]  chr18:56887400-56898002 [Contig_View]  GRP [Vega]
Ensembl hg38 (Hinxton)ENSG00000134443 [Gene_View]  chr18:56887400-56898002 [Contig_View]  GRP [Vega]
ICGC DataPortalENSG00000134443
cBioPortalGRP
AceView (NCBI)GRP
Genatlas (Paris)GRP
WikiGenes2922
SOURCE (Princeton)GRP
Genomic and cartography
GoldenPath hg19 (UCSC)GRP  -     chr18:56887400-56898002 +  18q21.32   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GRP  -     18q21.32   [Description]    (hg38-Dec_2013)
EnsemblGRP - 18q21.32 [CytoView hg19]  GRP - 18q21.32 [CytoView hg38]
Mapping of homologs : NCBIGRP [Mapview hg19]  GRP [Mapview hg38]
OMIM137260   
Gene and transcription
Genbank (Entrez)AB102889 AK307264 BC004488 BT006803 CK903483
RefSeq transcript (Entrez)NM_001012512 NM_001012513 NM_002091
RefSeq genomic (Entrez)AC_000150 NC_000018 NC_018929 NT_010966 NW_001838469 NW_004929411
Consensus coding sequences : CCDS (NCBI)GRP
Cluster EST : UnigeneHs.153444 [ NCBI ]
CGAP (NCI)Hs.153444
Alternative Splicing : Fast-db (Paris)GSHG0014083
Alternative Splicing GalleryENSG00000134443
Gene ExpressionGRP [ NCBI-GEO ]     GRP [ SEEK ]   GRP [ MEM ]
SOURCE (Princeton)Expression in : [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP07492 (Uniprot)
NextProtP07492  [Medical]
With graphics : InterProP07492
Splice isoforms : SwissVarP07492 (Swissvar)
Domaine pattern : Prosite (Expaxy)BOMBESIN (PS00257)   
Domains : Interpro (EBI)Bombesin    Gastrin-RP   
Related proteins : CluSTrP07492
Domain families : Pfam (Sanger)Bombesin (PF02044)   
Domain families : Pfam (NCBI)pfam02044   
DMDM Disease mutations2922
Blocks (Seattle)P07492
Human Protein AtlasENSG00000134443
Peptide AtlasP07492
HPRD08845
IPIIPI00011722   IPI00218671   IPI00218672   IPI00974355   IPI00980093   
Protein Interaction databases
DIP (DOE-UCLA)P07492
IntAct (EBI)P07492
FunCoupENSG00000134443
BioGRIDGRP
IntegromeDBGRP
STRING (EMBL)GRP
Ontologies - Pathways
QuickGOP07492
Ontology : AmiGOreceptor binding  neuropeptide hormone activity  extracellular region  extracellular space  signal transduction  neuropeptide signaling pathway  
Ontology : EGO-EBIreceptor binding  neuropeptide hormone activity  extracellular region  extracellular space  signal transduction  neuropeptide signaling pathway  
Protein Interaction DatabaseGRP
DoCM (Curated mutations)GRP
Wikipedia pathwaysGRP
Gene fusion - rearrangements
Polymorphisms : SNP, variants
NCBI Variation ViewerGRP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GRP
dbVarGRP
ClinVarGRP
1000_GenomesGRP 
Exome Variant ServerGRP
SNP (GeneSNP Utah)GRP
SNP : HGBaseGRP
Genetic variants : HAPMAPGRP
Genomic Variants (DGV)GRP [DGVbeta]
Mutations
ICGC Data PortalENSG00000134443 
Somatic Mutations in Cancer : COSMICGRP 
CONAN: Copy Number AnalysisGRP 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
Diseases
DECIPHER (Syndromes)18:56887400-56898002
Mutations and Diseases : HGMDGRP
OMIM137260   
MedgenGRP
NextProtP07492 [Medical]
GENETestsGRP
Disease Genetic AssociationGRP
Huge Navigator GRP [HugePedia]  GRP [HugeCancerGEM]
snp3D : Map Gene to Disease2922
DGIdb (Drug Gene Interaction db)GRP
General knowledge
Homologs : HomoloGeneGRP
Homology/Alignments : Family Browser (UCSC)GRP
Phylogenetic Trees/Animal Genes : TreeFamGRP
Chemical/Protein Interactions : CTD2922
Chemical/Pharm GKB GenePA28999
Clinical trialGRP
Cancer Resource (Charite)ENSG00000134443
Other databases
Probes
Litterature
PubMed58 Pubmed reference(s) in Entrez
CoreMineGRP
GoPubMedGRP
iHOPGRP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2014Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Feb 14 16:06:22 CET 2015

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