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GRPEL1 (GrpE like 1, mitochondrial)

Identity

Alias_namesGrpE-like 1, mitochondrial (E. coli)
Alias_symbol (synonym)FLJ25609
GrpE
hMGE
Other aliasHMGE
mt-GrpE#1
HGNC (Hugo) GRPEL1
LocusID (NCBI) 80273
Atlas_Id 64057
Location 4p16.1  [Link to chromosome band 4p16]
Location_base_pair Starts at 7058895 and ends at 7068210 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GRPEL1   19696
Cards
Entrez_Gene (NCBI)GRPEL1  80273  GrpE like 1, mitochondrial
AliasesGrpE; HMGE; mt-GrpE#1
GeneCards (Weizmann)GRPEL1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:7058895-7068210 [Contig_View]  GRPEL1 [Vega]
TCGA cBioPortalGRPEL1
AceView (NCBI)GRPEL1
Genatlas (Paris)GRPEL1
WikiGenes80273
SOURCE (Princeton)GRPEL1
Genetics Home Reference (NIH)GRPEL1
Genomic and cartography
GoldenPath hg38 (UCSC)GRPEL1  -     chr4:7058895-7068210 -  4p16.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GRPEL1  -     4p16.1   [Description]    (hg19-Feb_2009)
EnsemblGRPEL1 - 4p16.1 [CytoView hg19]  GRPEL1 - 4p16.1 [CytoView hg38]
Mapping of homologs : NCBIGRPEL1 [Mapview hg19]  GRPEL1 [Mapview hg38]
OMIM606173   
Gene and transcription
Genbank (Entrez)AF070525 AF087896 AF298592 AK098475 AK301695
RefSeq transcript (Entrez)NM_025196
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GRPEL1
Cluster EST : UnigeneHs.443723 [ NCBI ]
CGAP (NCI)Hs.443723
Gene ExpressionGRPEL1 [ NCBI-GEO ]   GRPEL1 [ EBI - ARRAY_EXPRESS ]   GRPEL1 [ SEEK ]   GRPEL1 [ MEM ]
Gene Expression Viewer (FireBrowse)GRPEL1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80273
GTEX Portal (Tissue expression)GRPEL1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HAV7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HAV7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HAV7
Splice isoforms : SwissVarQ9HAV7
PhosPhoSitePlusQ9HAV7
Domaine pattern : Prosite (Expaxy)GRPE (PS01071)   
Domains : Interpro (EBI)GrpE    GrpE_coiled_coil    GrpE_head   
Domain families : Pfam (Sanger)GrpE (PF01025)   
Domain families : Pfam (NCBI)pfam01025   
Conserved Domain (NCBI)GRPEL1
DMDM Disease mutations80273
Blocks (Seattle)GRPEL1
SuperfamilyQ9HAV7
Peptide AtlasQ9HAV7
HPRD07550
IPIIPI00029557   IPI00909181   
Protein Interaction databases
DIP (DOE-UCLA)Q9HAV7
IntAct (EBI)Q9HAV7
BioGRIDGRPEL1
STRING (EMBL)GRPEL1
ZODIACGRPEL1
Ontologies - Pathways
QuickGOQ9HAV7
Ontology : AmiGOadenyl-nucleotide exchange factor activity  presequence translocase-associated import motor  nucleus  mitochondrion  mitochondrial matrix  protein folding  protein import into mitochondrial matrix  protein homodimerization activity  regulation of catalytic activity  unfolded protein binding  chaperone binding  
Ontology : EGO-EBIadenyl-nucleotide exchange factor activity  presequence translocase-associated import motor  nucleus  mitochondrion  mitochondrial matrix  protein folding  protein import into mitochondrial matrix  protein homodimerization activity  regulation of catalytic activity  unfolded protein binding  chaperone binding  
NDEx NetworkGRPEL1
Atlas of Cancer Signalling NetworkGRPEL1
Wikipedia pathwaysGRPEL1
Orthology - Evolution
OrthoDB80273
Phylogenetic Trees/Animal Genes : TreeFamGRPEL1
HOVERGENQ9HAV7
HOGENOMQ9HAV7
Homologs : HomoloGeneGRPEL1
Homology/Alignments : Family Browser (UCSC)GRPEL1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGRPEL1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GRPEL1
dbVarGRPEL1
ClinVarGRPEL1
1000_GenomesGRPEL1 
Exome Variant ServerGRPEL1
ExAC (Exome Aggregation Consortium)GRPEL1 (select the gene name)
Genetic variants : HAPMAP80273
Genomic Variants (DGV)GRPEL1 [DGVbeta]
DECIPHERGRPEL1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGRPEL1 
Mutations
ICGC Data PortalGRPEL1 
TCGA Data PortalGRPEL1 
Broad Tumor PortalGRPEL1
OASIS PortalGRPEL1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGRPEL1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGRPEL1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch GRPEL1
DgiDB (Drug Gene Interaction Database)GRPEL1
DoCM (Curated mutations)GRPEL1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GRPEL1 (select a term)
intoGenGRPEL1
Cancer3DGRPEL1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606173   
Orphanet
MedgenGRPEL1
Genetic Testing Registry GRPEL1
NextProtQ9HAV7 [Medical]
TSGene80273
GENETestsGRPEL1
Target ValidationGRPEL1
Huge Navigator GRPEL1 [HugePedia]
snp3D : Map Gene to Disease80273
BioCentury BCIQGRPEL1
ClinGenGRPEL1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80273
Chemical/Pharm GKB GenePA134918140
Clinical trialGRPEL1
Miscellaneous
canSAR (ICR)GRPEL1 (select the gene name)
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGRPEL1
EVEXGRPEL1
GoPubMedGRPEL1
iHOPGRPEL1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:51:31 CEST 2017

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