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GRPEL2 (GrpE like 2, mitochondrial)

Identity

Alias_namesGrpE-like 2, mitochondrial (E. coli)
Alias_symbol (synonym)DKFZp451C205
Mt-GrpE#2
FLJ23713
Other alias
HGNC (Hugo) GRPEL2
LocusID (NCBI) 134266
Atlas_Id 64058
Location 5q32  [Link to chromosome band 5q32]
Location_base_pair Starts at 149345414 and ends at 149354583 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GRPEL2 (5q32) / GRPEL2 (5q32)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GRPEL2   21060
Cards
Entrez_Gene (NCBI)GRPEL2  134266  GrpE like 2, mitochondrial
AliasesMt-GrpE#2
GeneCards (Weizmann)GRPEL2
Ensembl hg19 (Hinxton)ENSG00000164284 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164284 [Gene_View]  chr5:149345414-149354583 [Contig_View]  GRPEL2 [Vega]
ICGC DataPortalENSG00000164284
TCGA cBioPortalGRPEL2
AceView (NCBI)GRPEL2
Genatlas (Paris)GRPEL2
WikiGenes134266
SOURCE (Princeton)GRPEL2
Genetics Home Reference (NIH)GRPEL2
Genomic and cartography
GoldenPath hg38 (UCSC)GRPEL2  -     chr5:149345414-149354583 +  5q32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GRPEL2  -     5q32   [Description]    (hg19-Feb_2009)
EnsemblGRPEL2 - 5q32 [CytoView hg19]  GRPEL2 - 5q32 [CytoView hg38]
Mapping of homologs : NCBIGRPEL2 [Mapview hg19]  GRPEL2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK074293 AK091237 AK096445 AK294005 AL704536
RefSeq transcript (Entrez)NM_152407
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GRPEL2
Cluster EST : UnigeneHs.511816 [ NCBI ]
CGAP (NCI)Hs.511816
Alternative Splicing GalleryENSG00000164284
Gene ExpressionGRPEL2 [ NCBI-GEO ]   GRPEL2 [ EBI - ARRAY_EXPRESS ]   GRPEL2 [ SEEK ]   GRPEL2 [ MEM ]
Gene Expression Viewer (FireBrowse)GRPEL2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)134266
GTEX Portal (Tissue expression)GRPEL2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TAA5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TAA5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TAA5
Splice isoforms : SwissVarQ8TAA5
PhosPhoSitePlusQ8TAA5
Domaine pattern : Prosite (Expaxy)GRPE (PS01071)   
Domains : Interpro (EBI)GrpE    GrpE_coiled_coil    GrpE_head   
Domain families : Pfam (Sanger)GrpE (PF01025)   
Domain families : Pfam (NCBI)pfam01025   
Conserved Domain (NCBI)GRPEL2
DMDM Disease mutations134266
Blocks (Seattle)GRPEL2
SuperfamilyQ8TAA5
Human Protein AtlasENSG00000164284
Peptide AtlasQ8TAA5
HPRD17079
IPIIPI00549666   IPI00910698   IPI00968293   
Protein Interaction databases
DIP (DOE-UCLA)Q8TAA5
IntAct (EBI)Q8TAA5
FunCoupENSG00000164284
BioGRIDGRPEL2
STRING (EMBL)GRPEL2
ZODIACGRPEL2
Ontologies - Pathways
QuickGOQ8TAA5
Ontology : AmiGOadenyl-nucleotide exchange factor activity  presequence translocase-associated import motor  mitochondrion  mitochondrial matrix  protein folding  protein import into mitochondrial matrix  protein homodimerization activity  regulation of catalytic activity  unfolded protein binding  chaperone binding  
Ontology : EGO-EBIadenyl-nucleotide exchange factor activity  presequence translocase-associated import motor  mitochondrion  mitochondrial matrix  protein folding  protein import into mitochondrial matrix  protein homodimerization activity  regulation of catalytic activity  unfolded protein binding  chaperone binding  
NDEx NetworkGRPEL2
Atlas of Cancer Signalling NetworkGRPEL2
Wikipedia pathwaysGRPEL2
Orthology - Evolution
OrthoDB134266
GeneTree (enSembl)ENSG00000164284
Phylogenetic Trees/Animal Genes : TreeFamGRPEL2
HOVERGENQ8TAA5
HOGENOMQ8TAA5
Homologs : HomoloGeneGRPEL2
Homology/Alignments : Family Browser (UCSC)GRPEL2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGRPEL2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GRPEL2
dbVarGRPEL2
ClinVarGRPEL2
1000_GenomesGRPEL2 
Exome Variant ServerGRPEL2
ExAC (Exome Aggregation Consortium)GRPEL2 (select the gene name)
Genetic variants : HAPMAP134266
Genomic Variants (DGV)GRPEL2 [DGVbeta]
DECIPHERGRPEL2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGRPEL2 
Mutations
ICGC Data PortalGRPEL2 
TCGA Data PortalGRPEL2 
Broad Tumor PortalGRPEL2
OASIS PortalGRPEL2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGRPEL2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGRPEL2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch GRPEL2
DgiDB (Drug Gene Interaction Database)GRPEL2
DoCM (Curated mutations)GRPEL2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GRPEL2 (select a term)
intoGenGRPEL2
Cancer3DGRPEL2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGRPEL2
Genetic Testing Registry GRPEL2
NextProtQ8TAA5 [Medical]
TSGene134266
GENETestsGRPEL2
Target ValidationGRPEL2
Huge Navigator GRPEL2 [HugePedia]
snp3D : Map Gene to Disease134266
BioCentury BCIQGRPEL2
ClinGenGRPEL2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD134266
Chemical/Pharm GKB GenePA134885090
Clinical trialGRPEL2
Miscellaneous
canSAR (ICR)GRPEL2 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGRPEL2
EVEXGRPEL2
GoPubMedGRPEL2
iHOPGRPEL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:51:31 CEST 2017

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