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GRWD1 (glutamate-rich WD repeat containing 1)

Identity

Alias_symbol (synonym)WDR28
GRWD
RRB1
Other aliasCDW4
HGNC (Hugo) GRWD1
LocusID (NCBI) 83743
Atlas_Id 64062
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 48949030 and ends at 48957164 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GRWD1   21270
Cards
Entrez_Gene (NCBI)GRWD1  83743  glutamate-rich WD repeat containing 1
AliasesCDW4; GRWD; RRB1; WDR28
GeneCards (Weizmann)GRWD1
Ensembl hg19 (Hinxton) [Gene_View]  chr19:48949030-48957164 [Contig_View]  GRWD1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:48949030-48957164 [Contig_View]  GRWD1 [Vega]
TCGA cBioPortalGRWD1
AceView (NCBI)GRWD1
Genatlas (Paris)GRWD1
WikiGenes83743
SOURCE (Princeton)GRWD1
Genetics Home Reference (NIH)GRWD1
Genomic and cartography
GoldenPath hg19 (UCSC)GRWD1  -     chr19:48949030-48957164 +  19q13.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GRWD1  -     19q13.33   [Description]    (hg38-Dec_2013)
EnsemblGRWD1 - 19q13.33 [CytoView hg19]  GRWD1 - 19q13.33 [CytoView hg38]
Mapping of homologs : NCBIGRWD1 [Mapview hg19]  GRWD1 [Mapview hg38]
OMIM610597   
Gene and transcription
Genbank (Entrez)AF337808 AK074676 AK131055 AK300225 AK315625
RefSeq transcript (Entrez)NM_031485
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)GRWD1
Cluster EST : UnigeneHs.400625 [ NCBI ]
CGAP (NCI)Hs.400625
Gene ExpressionGRWD1 [ NCBI-GEO ]   GRWD1 [ EBI - ARRAY_EXPRESS ]   GRWD1 [ SEEK ]   GRWD1 [ MEM ]
Gene Expression Viewer (FireBrowse)GRWD1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)83743
GTEX Portal (Tissue expression)GRWD1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BQ67   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BQ67  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BQ67
Splice isoforms : SwissVarQ9BQ67
PhosPhoSitePlusQ9BQ67
Domaine pattern : Prosite (Expaxy)WD_REPEATS_1 (PS00678)    WD_REPEATS_2 (PS50082)    WD_REPEATS_REGION (PS50294)   
Domains : Interpro (EBI)G-protein_beta_WD-40_rep    Histone-bd_RBBP4_N    WD40/YVTN_repeat-like_dom    WD40_repeat    WD40_repeat_CS    WD40_repeat_dom   
Domain families : Pfam (Sanger)CAF1C_H4-bd (PF12265)    WD40 (PF00400)   
Domain families : Pfam (NCBI)pfam12265    pfam00400   
Domain families : Smart (EMBL)WD40 (SM00320)  
Conserved Domain (NCBI)GRWD1
DMDM Disease mutations83743
Blocks (Seattle)GRWD1
SuperfamilyQ9BQ67
Peptide AtlasQ9BQ67
HPRD11013
IPIIPI00027831   IPI00909965   IPI00847896   
Protein Interaction databases
DIP (DOE-UCLA)Q9BQ67
IntAct (EBI)Q9BQ67
BioGRIDGRWD1
STRING (EMBL)GRWD1
ZODIACGRWD1
Ontologies - Pathways
QuickGOQ9BQ67
Ontology : AmiGOnucleus  nucleolus  cytoplasm  poly(A) RNA binding  
Ontology : EGO-EBInucleus  nucleolus  cytoplasm  poly(A) RNA binding  
NDEx NetworkGRWD1
Atlas of Cancer Signalling NetworkGRWD1
Wikipedia pathwaysGRWD1
Orthology - Evolution
OrthoDB83743
Phylogenetic Trees/Animal Genes : TreeFamGRWD1
HOVERGENQ9BQ67
HOGENOMQ9BQ67
Homologs : HomoloGeneGRWD1
Homology/Alignments : Family Browser (UCSC)GRWD1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGRWD1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GRWD1
dbVarGRWD1
ClinVarGRWD1
1000_GenomesGRWD1 
Exome Variant ServerGRWD1
ExAC (Exome Aggregation Consortium)GRWD1 (select the gene name)
Genetic variants : HAPMAP83743
Genomic Variants (DGV)GRWD1 [DGVbeta]
DECIPHER (Syndromes)19:48949030-48957164  
CONAN: Copy Number AnalysisGRWD1 
Mutations
ICGC Data PortalGRWD1 
TCGA Data PortalGRWD1 
Broad Tumor PortalGRWD1
OASIS PortalGRWD1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGRWD1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGRWD1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GRWD1
DgiDB (Drug Gene Interaction Database)GRWD1
DoCM (Curated mutations)GRWD1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GRWD1 (select a term)
intoGenGRWD1
Cancer3DGRWD1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610597   
Orphanet
MedgenGRWD1
Genetic Testing Registry GRWD1
NextProtQ9BQ67 [Medical]
TSGene83743
GENETestsGRWD1
Huge Navigator GRWD1 [HugePedia]
snp3D : Map Gene to Disease83743
BioCentury BCIQGRWD1
ClinGenGRWD1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD83743
Chemical/Pharm GKB GenePA134897548
Clinical trialGRWD1
Miscellaneous
canSAR (ICR)GRWD1 (select the gene name)
Probes
Litterature
PubMed32 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGRWD1
EVEXGRWD1
GoPubMedGRWD1
iHOPGRWD1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:06:59 CET 2017

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