Atlas of Genetics and Cytogenetics in Oncology and Haematology

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GSTCD (glutathione S-transferase, C-terminal domain containing)

Identity

Other names-
HGNC (Hugo) GSTCD
LocusID (NCBI) 79807
Location 4q24
Location_base_pair Starts at 106631970 and ends at 106768882 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)GSTCD   25806
Entrez_Gene (NCBI)GSTCD  79807  glutathione S-transferase, C-terminal domain containing
Cards
GeneCards (Weizmann)GSTCD
Ensembl (Hinxton)ENSG00000138780 [Gene_View]  chr4:106631970-106768882 [Contig_View]  GSTCD [Vega]
AceView (NCBI)GSTCD
Genatlas (Paris)GSTCD
SOURCE (Stanford)NM_001031720 NM_024751
Genomic and cartography
GoldenPath (UCSC)GSTCD  -  4q24   chr4:106631970-106768882 +  4q24   [Description]    (hg19-Feb_2009)
EnsemblGSTCD - 4q24 [CytoView]
Mapping of homologs : NCBIGSTCD [Mapview]
Gene and transcription
Genbank (Entrez)AK023335 AK225563 AK292355 AK303547 BC032942
RefSeq transcript (SRS)NM_001031720 NM_024751
RefSeq transcript (Entrez)NM_001031720 NM_024751
RefSeq genomic (SRS)AC_000136 NC_000004 NC_018915 NT_016354 NW_001838915 NW_004078021
RefSeq genomic (Entrez)AC_000136 NC_000004 NC_018915 NT_016354 NW_001838915 NW_004078021
Consensus coding sequences : CCDS (NCBI)GSTCD
Cluster EST : UnigeneHs.161429 [ SRS ] Hs.161429 [ NCBI ]
CGAP (NCI)Hs.161429
Alternative Splicing : Fast-db (Paris)GSHG0022770
Alternative Splicing GalleryENSG00000138780
Gene ExpressionGSTCD [ NCBI-GEO ]   GSTCD [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NEC7 (SRS) Q8NEC7 (Uniprot)
NextProtQ8NEC7
With graphics : InterProQ8NEC7
Splice isoforms : SwissVarQ8NEC7(Swissvar)
Domaine pattern : Prosite (SRS)GST_CTER (PS50405)   
Domaine pattern : Prosite (Expaxy)GST_CTER (PS50405)   
Domains : Interpro (SRS)Glutathione-S-Trfase_C-like    Glutathione_S_Trfase/Cl_chnl_C    Methyltranfer_dom   
Domains : Interpro (EBI)Glutathione-S-Trfase_C-like    Glutathione_S_Trfase/Cl_chnl_C    Methyltranfer_dom   
Related proteins : CluSTrQ8NEC7
Domain families : Pfam (SRS)Methyltransf_32 (PF13679)   
Domain families : Pfam (Sanger)Methyltransf_32 (PF13679)   
Domain families : Pfam (NCBI)pfam13679   
DMDM79807
Blocks (Seattle)Q8NEC7
Human Protein AtlasENSG00000138780
HPRD07823
IPIIPI00478068   IPI00796339   IPI00966693   IPI00968140   IPI00965782   IPI00966166   
Protein Interaction databases
DIP (DOE-UCLA)Q8NEC7
IntAct (EBI)Q8NEC7
FunCoupENSG00000138780
REACTOMEGSTCD
Protein Interaction Database79807
BioGRIDGSTCD
InParanoidQ8NEC7
Interologous Interaction database Q8NEC7
IntegromeDBGSTCD
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)GSTCD
SNP (GeneSNP Utah)GSTCD
SNP : HGBaseGSTCD
Genetic variants : HAPMAPGSTCD
Somatic Mutations in Cancer : COSMICGSTCD 
CONAN: Copy Number AnalysisGSTCD 
Mutations and Diseases : HGMDGSTCD
OMIM
GENETests
Disease Genetic AssociationGSTCD
Huge Navigator GSTCD [HugePedia]  GSTCD [HugeCancerGEM]
Genomic VariantsGSTCD  GSTCD [DGVbeta]
snp3D : Map Gene to Disease79807
General knowledge
Homologs : HomoloGeneGSTCD
Homology/Alignments : Family Browser (UCSC)GSTCD
Phylogenetic Trees/Animal Genes : TreeFamGSTCD
Chemical/Protein Interactions : CTD79807
Chemical/Pharm GKB GenePA144596427
Clinical trialGSTCD
Cancer Resource (Charite)ENSG00000138780
Ontology : AmiGOmolecular_function  cellular_component  biological_process  
Ontology : EGO-EBImolecular_function  cellular_component  biological_process  
Other databases
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
PubGeneGSTCD
iHOPGSTCD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:42:44 CEST 2013
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