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GSTT1-AS1 (GSTT1 antisense RNA 1)

Identity

Alias_symbol (synonym)lncRNA-AS-GSTT1(1-72)
lncRNA-CD244
lncRNA-BC050410
Other alias-
HGNC (Hugo) GSTT1-AS1
LocusID (NCBI) 106099130
Atlas_Id 77774
Location 22_KI270879v1_alt  [Link to chromosome band 22]
Location_base_pair Starts at 269737 and ends at 270386 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)GSTT1-AS1   51839
Cards
Entrez_Gene (NCBI)GSTT1-AS1  106099130  GSTT1 antisense RNA 1
Aliases
GeneCards (Weizmann)GSTT1-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr22_KI270879v1_alt:269737-270386 [Contig_View]  GSTT1-AS1 [Vega]
TCGA cBioPortalGSTT1-AS1
AceView (NCBI)GSTT1-AS1
Genatlas (Paris)GSTT1-AS1
WikiGenes106099130
SOURCE (Princeton)GSTT1-AS1
Genetics Home Reference (NIH)GSTT1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)GSTT1-AS1  -     chr22_KI270879v1_alt:269737-270386 +  22_KI270879v1_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GSTT1-AS1  -     22_KI270879v1_alt   [Description]    (hg19-Feb_2009)
EnsemblGSTT1-AS1 - 22_KI270879v1_alt [CytoView hg19]  GSTT1-AS1 - 22_KI270879v1_alt [CytoView hg38]
Mapping of homologs : NCBIGSTT1-AS1 [Mapview hg19]  GSTT1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC050410 BF511344 BQ771818 BQ949204 CN271767
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NT_187633
Consensus coding sequences : CCDS (NCBI)GSTT1-AS1
Cluster EST : UnigeneHs.738514 [ NCBI ]
CGAP (NCI)Hs.738514
Gene ExpressionGSTT1-AS1 [ NCBI-GEO ]   GSTT1-AS1 [ EBI - ARRAY_EXPRESS ]   GSTT1-AS1 [ SEEK ]   GSTT1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)GSTT1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)106099130
GTEX Portal (Tissue expression)GSTT1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GSTT1-AS1
DMDM Disease mutations106099130
Blocks (Seattle)GSTT1-AS1
Protein Interaction databases
BioGRIDGSTT1-AS1
STRING (EMBL)GSTT1-AS1
ZODIACGSTT1-AS1
Ontologies - Pathways
Huge Navigator GSTT1-AS1 [HugePedia]
snp3D : Map Gene to Disease106099130
BioCentury BCIQGSTT1-AS1
ClinGenGSTT1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD106099130
Clinical trialGSTT1-AS1
Miscellaneous
canSAR (ICR)GSTT1-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGSTT1-AS1
EVEXGSTT1-AS1
GoPubMedGSTT1-AS1
iHOPGSTT1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:49:53 CET 2017

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