Atlas of Genetics and Cytogenetics in Oncology and Haematology


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GSTTP1 (glutathione S-transferase theta pseudogene 1)

Identity

Alias_symbol (synonym)HS322B1A
Other aliasGSTT4
HGNC (Hugo) GSTTP1
LocusID (NCBI) 25774
Atlas_Id 64080
Location 22_KI270879v1_alt  [Link to chromosome band 22]
Location_base_pair Starts at 234770 and ends at 241433 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GSTTP1   26930
Cards
Entrez_Gene (NCBI)GSTTP1  25774  glutathione S-transferase theta pseudogene 1
AliasesGSTT4; HS322B1A
GeneCards (Weizmann)GSTTP1
Ensembl hg19 (Hinxton)ENSG00000276950 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000276950 [Gene_View]  chr22_KI270879v1_alt:234770-241433 [Contig_View]  GSTTP1 [Vega]
ICGC DataPortalENSG00000276950
TCGA cBioPortalGSTTP1
AceView (NCBI)GSTTP1
Genatlas (Paris)GSTTP1
WikiGenes25774
SOURCE (Princeton)GSTTP1
Genetics Home Reference (NIH)GSTTP1
Genomic and cartography
GoldenPath hg38 (UCSC)GSTTP1  -     chr22_KI270879v1_alt:234770-241433 -  22_KI270879v1_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GSTTP1  -     22_KI270879v1_alt   [Description]    (hg19-Feb_2009)
EnsemblGSTTP1 - 22_KI270879v1_alt [CytoView hg19]  GSTTP1 - 22_KI270879v1_alt [CytoView hg38]
Mapping of homologs : NCBIGSTTP1 [Mapview hg19]  GSTTP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL050257 BC096726 BC098108 BC098364 BC099710
RefSeq transcript (Entrez)NM_001039498 NM_015371
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_187633
Consensus coding sequences : CCDS (NCBI)GSTTP1
Cluster EST : UnigeneHs.652490 [ NCBI ]
CGAP (NCI)Hs.652490
Alternative Splicing GalleryENSG00000276950
Gene ExpressionGSTTP1 [ NCBI-GEO ]   GSTTP1 [ EBI - ARRAY_EXPRESS ]   GSTTP1 [ SEEK ]   GSTTP1 [ MEM ]
Gene Expression Viewer (FireBrowse)GSTTP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)25774
GTEX Portal (Tissue expression)GSTTP1
Human Protein AtlasENSG00000276950-GSTTP1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GSTTP1
DMDM Disease mutations25774
Blocks (Seattle)GSTTP1
Human Protein Atlas [tissue]ENSG00000276950-GSTTP1 [tissue]
HPRD13673
Protein Interaction databases
FunCoupENSG00000276950
BioGRIDGSTTP1
STRING (EMBL)GSTTP1
ZODIACGSTTP1
Ontologies - Pathways
Huge Navigator GSTTP1 [HugePedia]
snp3D : Map Gene to Disease25774
BioCentury BCIQGSTTP1
ClinGenGSTTP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD25774
Clinical trialGSTTP1
Miscellaneous
canSAR (ICR)GSTTP1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGSTTP1
EVEXGSTTP1
GoPubMedGSTTP1
iHOPGSTTP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:49:53 CET 2017

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