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GTF2IP1 (general transcription factor IIi pseudogene 1)

Identity

Alias_namesWBSCR7
general transcription factor II, i, pseudogene 1
Other alias
HGNC (Hugo) GTF2IP1
LocusID (NCBI) 2970
Atlas_Id 64088
Location 7q11.23  [Link to chromosome band 7q11]
Location_base_pair Starts at 73154929 and ends at 73207296 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GTF2IP1 (7q11.23) / CHCHD3 (7q32.3)LOC100507412 (-) / GTF2IP1 (7q11.23)NF1 (17q11.2) / GTF2IP1 (7q11.23)
RPL13A (19q13.33) / GTF2IP1 (7q11.23)cytochrome_b () / GTF2IP1 (7q11.23)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GTF2IP1   4660
Cards
Entrez_Gene (NCBI)GTF2IP1  2970  general transcription factor IIi pseudogene 1
AliasesWBSCR7
GeneCards (Weizmann)GTF2IP1
Ensembl hg19 (Hinxton)ENSG00000277053 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000277053 [Gene_View]  chr7:73154929-73207296 [Contig_View]  GTF2IP1 [Vega]
ICGC DataPortalENSG00000277053
TCGA cBioPortalGTF2IP1
AceView (NCBI)GTF2IP1
Genatlas (Paris)GTF2IP1
WikiGenes2970
SOURCE (Princeton)GTF2IP1
Genetics Home Reference (NIH)GTF2IP1
Genomic and cartography
GoldenPath hg38 (UCSC)GTF2IP1  -     chr7:73154929-73207296 +  7q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GTF2IP1  -     7q11.23   [Description]    (hg19-Feb_2009)
EnsemblGTF2IP1 - 7q11.23 [CytoView hg19]  GTF2IP1 - 7q11.23 [CytoView hg38]
Mapping of homologs : NCBIGTF2IP1 [Mapview hg19]  GTF2IP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA576587 AK299175 BC045632 BQ021719 DQ786291
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GTF2IP1
Cluster EST : UnigeneHs.743231 [ NCBI ]
CGAP (NCI)Hs.743231
Alternative Splicing GalleryENSG00000277053
Gene ExpressionGTF2IP1 [ NCBI-GEO ]   GTF2IP1 [ EBI - ARRAY_EXPRESS ]   GTF2IP1 [ SEEK ]   GTF2IP1 [ MEM ]
Gene Expression Viewer (FireBrowse)GTF2IP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)2970
GTEX Portal (Tissue expression)GTF2IP1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GTF2IP1
DMDM Disease mutations2970
Blocks (Seattle)GTF2IP1
Human Protein AtlasENSG00000277053
Protein Interaction databases
FunCoupENSG00000277053
BioGRIDGTF2IP1
STRING (EMBL)GTF2IP1
ZODIACGTF2IP1
Ontologies - Pathways
Huge Navigator GTF2IP1 [HugePedia]
snp3D : Map Gene to Disease2970
BioCentury BCIQGTF2IP1
ClinGenGTF2IP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2970
Chemical/Pharm GKB GenePA29046
Clinical trialGTF2IP1
Miscellaneous
canSAR (ICR)GTF2IP1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGTF2IP1
EVEXGTF2IP1
GoPubMedGTF2IP1
iHOPGTF2IP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:51:39 CEST 2017

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