Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

GTF2IRD2P1 (GTF2I repeat domain containing 2 pseudogene 1)

Identity

Alias_namesGTF2IRD2P
GTF2I repeat domain containing 2 pseudogene
Other alias
HGNC (Hugo) GTF2IRD2P1
LocusID (NCBI) 401375
Atlas_Id 64093
Location 7q11.23  [Link to chromosome band 7q11]
Location_base_pair Starts at 72656902 and ends at 72685658 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)GTF2IRD2P1   33127
Cards
Entrez_Gene (NCBI)GTF2IRD2P1  401375  GTF2I repeat domain containing 2 pseudogene 1
AliasesGTF2IRD2P
GeneCards (Weizmann)GTF2IRD2P1
Ensembl hg19 (Hinxton) [Gene_View]  chr7:72656902-72685658 [Contig_View]  GTF2IRD2P1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:72656902-72685658 [Contig_View]  GTF2IRD2P1 [Vega]
TCGA cBioPortalGTF2IRD2P1
AceView (NCBI)GTF2IRD2P1
Genatlas (Paris)GTF2IRD2P1
WikiGenes401375
SOURCE (Princeton)GTF2IRD2P1
Genetics Home Reference (NIH)GTF2IRD2P1
Genomic and cartography
GoldenPath hg19 (UCSC)GTF2IRD2P1  -     chr7:72656902-72685658 -  7q11.23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GTF2IRD2P1  -     7q11.23   [Description]    (hg38-Dec_2013)
EnsemblGTF2IRD2P1 - 7q11.23 [CytoView hg19]  GTF2IRD2P1 - 7q11.23 [CytoView hg38]
Mapping of homologs : NCBIGTF2IRD2P1 [Mapview hg19]  GTF2IRD2P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY312852
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000007 NC_018918 NG_033736 NT_007933 NW_004929332
Consensus coding sequences : CCDS (NCBI)GTF2IRD2P1
Cluster EST : UnigeneHs.651178 [ NCBI ]
CGAP (NCI)Hs.651178
Gene ExpressionGTF2IRD2P1 [ NCBI-GEO ]   GTF2IRD2P1 [ EBI - ARRAY_EXPRESS ]   GTF2IRD2P1 [ SEEK ]   GTF2IRD2P1 [ MEM ]
Gene Expression Viewer (FireBrowse)GTF2IRD2P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)401375
GTEX Portal (Tissue expression)GTF2IRD2P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GTF2IRD2P1
DMDM Disease mutations401375
Blocks (Seattle)GTF2IRD2P1
Protein Interaction databases
BioGRIDGTF2IRD2P1
STRING (EMBL)GTF2IRD2P1
ZODIACGTF2IRD2P1
Ontologies - Pathways
Huge Navigator GTF2IRD2P1 [HugePedia]
snp3D : Map Gene to Disease401375
BioCentury BCIQGTF2IRD2P1
ClinGenGTF2IRD2P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401375
Clinical trialGTF2IRD2P1
Miscellaneous
canSAR (ICR)GTF2IRD2P1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGTF2IRD2P1
EVEXGTF2IRD2P1
GoPubMedGTF2IRD2P1
iHOPGTF2IRD2P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:07:08 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.